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Data and Tools Integration in the Canadian Open Neuroscience Platform

Authors: Poline JBDas SGlatard TMadjar CDickie EWLecours XBeaudry TBeck NBehan BBrown STBujold DBeauvais MCaron BCzech CDharsee MDugré MEvans KGee TIppoliti GKiar GKnoppers BMKuehn TLe DLo DMazaheri MMacFarlane DMuja NO'Brien EAO'Callaghan LPaiva SPark PQuesnel DRabelais HRioux PLegault MTremblay-Mercier JRotenberg DStone JStrauss TZaytseva KZhou JDuchesne SKhan ARHill SEvans AC


Affiliations

1 McGill University, Montreal Neurological Institute and Hospital, McConnell Brain Imaging Centre, Neuro Data Science ORIGAMI lab, Montreal, Quebec, Canada. jbpoline@gmail.com.
2 McGill University, Healthy Brains Healthy Lives, Neurohub, Montreal, Quebec, Canada. jbpoline@gmail.com.
3 McGill University, McConnell Brain Imaging Centre, Montreal, Quebec, Canada. jbpoline@gmail.com.
4 McGill University, Ludmer Centre for Mental Health, Montreal Neurological Institute, McGill Centre for Integrative Neuroscience, Montreal, Quebec, Canada.
5 Computer Science, Concordia University, Montreal, Quebec, Canada.
6 Krembil Centre for Neuroinformatics, Toronto, Ontario, Canada.
7 Ontario Brain Institute, Toronto, Ontario, Canada.
8 Hewlett Packard Entreprise, Pittsburgh, Pennsylvania, US.
9 McGill University, Canadian Centre for Computational Genomic

Description

We present the Canadian Open Neuroscience Platform (CONP) portal to answer the research community's need for flexible data sharing resources and provide advanced tools for search and processing infrastructure capacity. This portal differs from previous data sharing projects as it integrates datasets originating from a number of already existing platforms or databases through DataLad, a file level data integrity and access layer. The portal is also an entry point for searching and accessing a large number of standardized and containerized software and links to a computing infrastructure. It leverages community standards to help document and facilitate reuse of both datasets and tools, and already shows a growing community adoption giving access to more than 60 neuroscience datasets and over 70 tools. The CONP portal demonstrates the feasibility and offers a model of a distributed data and tool management system across 17 institutions throughout Canada.


Links

PubMed: https://pubmed.ncbi.nlm.nih.gov/37024500/

DOI: 10.1038/s41597-023-01946-1