Keyword search (4,163 papers available)

"Fraser DJ" Authored Publications:

Title Authors PubMed ID
1 eDNA Provides Accurate Population Abundance Estimates With Bioenergetics and Particle Mass-Balance Modelling Beaulieu J; Yates MC; Fraser DJ; Cristescu ME; Derry AM; 41913704
BIOLOGY
2 Endangered species laws and the inclusion of Indigenous knowledges and sciences in risk assessments Grimm J; Soares BE; Zanjani LV; Ballard M; Chiblow S; Andrade RS; Duncan AT; Fraser DJ; Mandrak NE; Bernos TA; 41684052
BIOLOGY
3 Intraspecific complexity in mercury contamination of two harvested fishes revealed by genetics: Food security and conservation implications Gibelli J; Michaelides S; Won H; Chamlian B; Bampfylde C; Maclean B; Giroux P; Gray QZ; Voyageur M; Jeon HB; Bouchard R; Fraser DJ; 41380599
BIOLOGY
4 Genomics-Enabled Mixed-Stock Analysis Uncovers Intraspecific Migratory Complexity and Detects Unsampled Populations in a Harvested Fish Gibelli J; Won H; Michaelides S; Jeon HB; Fraser DJ; 39995301
BIOLOGY
5 Widespread admixture blurs population structure and confounds Lake Trout (Salvelinus namaycush) conservation even in the genomic era Bernos TA; Gibelli J; Michaelides S; Won H; Jeon HB; Marin K; Boguski DA; Janjua MY; Gallagher CP; Howland KL; Fraser DJ; 39730611
BIOLOGY
6 Temporal Variability in Effective Size ( [Formula] ) Identifies Potential Sources of Discrepancies Between Mark Recapture and Close Kin Mark Recapture Estimates of Population Abundance Ruzzante DE; McCracken GR; Fraser DJ; MacMillan J; Buhariwalla C; Flemming JM; 39582254
BIOLOGY
7 Global assessment of effective population sizes: Consistent taxonomic differences in meeting the 50/500 rule Clarke SH; Lawrence ER; Matte JM; Gallagher BK; Salisbury SJ; Michaelides SN; Koumrouyan R; Ruzzante DE; Grant JWA; Fraser DJ; 38613250
BIOLOGY
8 Recruitment dynamics of juvenile salmonids: Comparisons among populations and with classic case studies Matte JO; Fraser DJ; Grant JWA; 38599588
BIOLOGY
9 Microgeographic variation in demography and thermal regimes stabilize regional abundance of a widespread freshwater fish Gallagher BK; Fraser DJ; 38071739
BIOLOGY
10 Macrogenetics reveals multifaceted influences of environmental variation on vertebrate population genetic diversity across the Americas Lawrence ER; Pedersen EJ; Fraser DJ; 37365672
BIOLOGY
11 Demographic resilience of brook trout populations subjected to experimental size-selective harvesting Clarke SH; McCracken GR; Humphries S; Ruzzante DE; Grant JWA; Fraser DJ; 36426123
BIOLOGY
12 Neutral and adaptive drivers of genomic change in introduced brook trout (Salvelinus fontinalis) populations revealed by pooled sequencing Brookes B; Jeon HB; Derry AM; Post JR; Rogers SM; Humphries S; Fraser DJ; 35154655
BIOLOGY
13 What can be learned from fishers' perceptions for fishery management planning? Case study insights from Sainte-Marie, Madagascar Bernos TA; Travouck C; Ramasinoro N; Fraser DJ; Mathevon B; 34780489
BIOLOGY
14 Varying genetic imprints of road networks and human density in North American mammal populations Habrich AK; Lawrence ER; Fraser DJ; 34178111
BIOLOGY
15 Evaluating the correlation between genome-wide diversity and the release of plastic phenotypic variation in experimental translocations to novel natural environments. Yates MC, Fraser DJ 33274531
BIOLOGY
16 Size reductions and genomic changes within two generations in wild walleye populations: associated with harvest? Bowles E, Marin K, Mogensen S, MacLeod P, Fraser DJ 32684951
CONCORDIA
17 The relationship between eDNA particle concentration and organism abundance in nature is strengthened by allometric scaling. Yates MC, Glaser D, Post J, Cristescu ME, Fraser DJ, Derry AM 32638451
CONCORDIA
18 Small population size and low genomic diversity have no effect on fitness in experimental translocations of a wild fish. Yates MC, Bowles E, Fraser DJ 31771476
BIOLOGY
19 Population variation in density-dependent growth, mortality and their trade-off in a stream fish. Matte JM, Fraser DJ, Grant JWA 31642512
BIOLOGY
20 Causes of maladaptation. Brady SP, Bolnick DI, Angert AL, Gonzalez A, Barrett RDH, Crispo E, Derry AM, Eckert CG, Fraser DJ, Fussmann GF, Guichard F, Lamy T, McAdam AG, Newman AEM, Paccard A, Rolshausen G, Simons AM, Hendry AP 31417611
BIOLOGY
21 Conservation through the lens of (mal)adaptation: Concepts and meta-analysis. Derry AM, Fraser DJ, Brady SP, Astorg L, Lawrence ER, Martin GK, Matte JM, Negrín Dastis JO, Paccard A, Barrett RDH, Chapman LJ, Lane JE, Ballas CG, Close M, Crispo E 31417615
BIOLOGY
22 A critical assessment of estimating census population size from genetic population size (or vice versa) in three fishes. Yates MC, Bernos TA, Fraser DJ 29151884
BIOLOGY
23 Genetic diversity of small populations: Not always "doom and gloom"? Fraser DJ 29243868
BIOLOGY
24 Evaluating a 5-year metal contamination remediation and the biomonitoring potential of a freshwater gastropod along the Xiangjiang River, China. Li D, Pi J, Zhang T, Tan X, Fraser DJ 29770938
BIOLOGY
25 Geo-referenced population-specific microsatellite data across American continents, the MacroPopGen Database. Lawrence ER, Benavente JN, Matte JM, Marin K, Wells ZRR, Bernos TA, Krasteva N, Habrich A, Nessel GA, Koumrouyan RA, Fraser DJ 30944329
BIOLOGY

 

Title:Neutral and adaptive drivers of genomic change in introduced brook trout (Salvelinus fontinalis) populations revealed by pooled sequencing
Authors:Brookes BJeon HBDerry AMPost JRRogers SMHumphries SFraser DJ
Link:https://pubmed.ncbi.nlm.nih.gov/35154655/
DOI:10.1002/ece3.8584
Publication:Ecology and evolution
Keywords:Salvelinus fontinalisadaptive differentiationgenetic diversityintroduced speciesneutral diversitywhole-genome sequencing
PMID:35154655 Category: Date Added:2022-02-14
Dept Affiliation: BIOLOGY
1 Department of Biology Concordia University Montréal QC Canada.
2 Département des sciences biologiques Université du Québec à Montréal Montréal QC Canada.
3 Department of Biology University of Calgary Calgary AB Canada.
4 Parks Canada Natural Resource Management Branch Radium Hot Springs BC Canada.

Description:

Understanding the drivers of successful species invasions is important for conserving native biodiversity and for mitigating the economic impacts of introduced species. However, whole-genome resolution investigations of the underlying contributions of neutral and adaptive genetic variation in successful introductions are rare. Increased propagule pressure should result in greater neutral genetic variation, while environmental differences should elicit selective pressures on introduced populations, leading to adaptive differentiation. We investigated neutral and adaptive variation among nine introduced brook trout (Salvelinus fontinalis) populations using whole-genome pooled sequencing. The populations inhabit isolated alpine lakes in western Canada and descend from a common source, with an average of ~19 (range of 7-41) generations since introduction. We found some evidence of bottlenecks without recovery, no strong evidence of purifying selection, and little support that varying propagule pressure or differences in local environments shaped observed neutral genetic variation differences. Putative adaptive loci analysis revealed nonconvergent patterns of adaptive differentiation among lakes with minimal putatively adaptive loci (0.001%-0.15%) that did not correspond with tested environmental variables. Our results suggest that (i) introduction success is not always strongly influenced by genetic load; (ii) observed differentiation among introduced populations can be idiosyncratic, population-specific, or stochastic; and (iii) conservatively, in some introduced species, colonization barriers may be overcome by support through one aspect of propagule pressure or benign environmental conditions.





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