Keyword search (4,163 papers available)

"Rivaz H" Authored Publications:

Title Authors PubMed ID
1 Characterizing forearm skeletal muscle composition and function in breast cancer-related lymphedema using B-mode ultrasonography Whyte J; Towers A; Boily M; Rosenthall L; Rivaz H; Kilgour RD; 41674486
PERFORM
2 Statistical shape model-based estimation of registration error in computer-assisted total knee arthroplasty Gheflati B; Mirzaei M; Zuhars J; Rottoo S; Rivaz H; 41495592
ENCS
3 MedCLIP-SAMv2: Towards universal text-driven medical image segmentation Koleilat T; Asgariandehkordi H; Rivaz H; Xiao Y; 40779830
ENCS
4 Joint enhancement of automatic chest x-ray diagnosis and radiological gaze prediction with multistage cooperative learning Qiu Z; Rivaz H; Xiao Y; 40665596
ENCS
5 Deformable detection transformers for domain adaptable ultrasound localization microscopy with robustness to point spread function variations Gharamaleki SK; Helfield B; Rivaz H; 40640235
PHYSICS
6 Ultrasound and MRI-based evaluation of relationships between morphological and mechanical properties of the lower lumbar multifidus muscle in chronic low back pain Naghdi N; Masi S; Bertrand C; Rosenstein B; Cohen-Adad J; Rivaz H; Roy M; Fortin M; 40488869
HKAP
7 CASCADE-FSL: Few-shot learning for collateral evaluation in ischemic stroke Aktar M; Tampieri D; Xiao Y; Rivaz H; Kersten-Oertel M; 40250214
ENCS
8 Leveraging deep learning for nonlinear shape representation in anatomically parameterized statistical shape models Gheflati B; Mirzaei M; Rottoo S; Rivaz H; 39953355
ENCS
9 Open access segmentations of intraoperative brain tumor ultrasound images Behboodi B; Carton FX; Chabanas M; de Ribaupierre S; Solheim O; Munkvold BKR; Rivaz H; Xiao Y; Reinertsen I; 39047165
SOH
10 Comparing a Portable Motion Analysis System against the Gold Standard for Potential Anterior Cruciate Ligament Injury Prevention and Screening Karatzas N; Abdelnour P; Corban JPAH; Zhao KY; Veilleux LN; Bergeron SG; Fevens T; Rivaz H; Babouras A; Martineau PA; 38544237
PERFORM
11 SCANED: Siamese collateral assessment network for evaluation of collaterals from ischemic damage Aktar M; Xiao Y; Tehrani AKZ; Tampieri D; Rivaz H; Kersten-Oertel M; 38364600
ENCS
12 On the soft tissue ultrasound elastography using FEM based inversion approach Eshaghinia SS; Taghvaeipour A; Aghdam MM; Rivaz H; 38240143
ENCS
13 Bayesian workflow for the investigation of hierarchical classification models from tau-PET and structural MRI data across the Alzheimer's disease spectrum Belasso CJ; Cai Z; Bezgin G; Pascoal T; Stevenson J; Rahmouni N; Tissot C; Lussier F; Rosa-Neto P; Soucy JP; Rivaz H; Benali H; 37920382
PERFORM
14 Deep learning for collateral evaluation in ischemic stroke with imbalanced data Aktar M; Reyes J; Tampieri D; Rivaz H; Xiao Y; Kersten-Oertel M; 36635594
ENCS
15 Robust landmark-based brain shift correction with a Siamese neural network in ultrasound-guided brain tumor resection Pirhadi A; Salari S; Ahmad MO; Rivaz H; Xiao Y; 36306056
PERFORM
16 DiffeoRaptor: diffeomorphic inter-modal image registration using RaPTOR Masoumi N; Rivaz H; Ahmad MO; Xiao Y; 36173541
ENCS
17 Deep reconstruction of high-quality ultrasound images from raw plane-wave data: A simulation and in vivo study Goudarzi S; Rivaz H; 35728310
ENCS
18 Statistical morphological analysis reveals characteristic paraspinal muscle asymmetry in unilateral lumbar disc herniation Xiao Y; Fortin M; Ahn J; Rivaz H; Peters TM; Battié MC; 34341427
PERFORM
19 Multimodal 3D ultrasound and CT in image-guided spinal surgery: public database and new registration algorithms Masoumi N; Belasso CJ; Ahmad MO; Benali H; Xiao Y; Rivaz H; 33683544
PERFORM
20 LUMINOUS database: lumbar multifidus muscle segmentation from ultrasound images Belasso CJ; Behboodi B; Benali H; Boily M; Rivaz H; Fortin M; 33097024
PERFORM
21 Lumbar Multifidus Muscle Characteristics, Body Composition, and Injury in University Rugby Players Lévesque J; Rivaz H; Rizk A; Frenette S; Boily M; Fortin M; 32997748
PERFORM
22 Seasonal Changes in Lumbar Multifidus Muscle in University Rugby Players. Roy A, Rivaz H, Rizk A, Frenette S, Boily M, Fortin M 32925493
PERFORM
23 Automatic collateral circulation scoring in ischemic stroke using 4D CT angiography with low-rank and sparse matrix decomposition. Aktar M, Tampieri D, Rivaz H, Kersten-Oertel M, Xiao Y 32662055
ENCS
24 Improving 3D ultrasound prostate localisation in radiotherapy through increased automation of interfraction matching. Grimwood A, Rivaz H, Zhou H, McNair HA, Yakubowski K, Bamber JC, Tree AC, Harris EJ 32387546
PHYSICS
25 Two-stage ultrasound image segmentation using U-Net and test time augmentation. Amiri M; Brooks R; Behboodi B; Rivaz H; 32350786
IMAGING
26 The effect of low back pain and lower limb injury on lumbar multifidus muscle morphology and function in university soccer players. Nandlall N, Rivaz H, Rizk A, Frenette S, Boily M, Fortin M 32050966
PERFORM
27 Ultrasonography of Lumbar Multifidus Muscle in University American Football Players. Schryver A; Rivaz H; Rizk A; Frenette S; Boily M; Fortin M; 32028457
PERFORM
28 3D normalized cross-correlation for estimation of the displacement field in ultrasound elastography. Mirzaei M, Asif A, Fortin M, Rivaz H 31790861
PERFORM
29 Nonlocal Coherent Denoising of RF Data for Ultrasound Elastography. Khavari P, Asif A, Boily M, Rivaz H 30034676
ENCS
30 Ultrasound Elastography of the Prostate Using an Unconstrained Modulus Reconstruction Technique: A Pilot Clinical Study. Mousavi SR, Rivaz H, Czarnota GJ, Samani A, Sadeghi-Naini A 28735201
PERFORM
31 Corrigendum to "Ultrasonography of multifidus muscle morphology and function in ice hockey players with and without low back pain" [Physical Therapy in Sport 37 (2019) 77-85]. Fortin M, Rizk A, Frenette S, Boily M, Rivaz H 31005031
PERFORM
32 Deformable registration of preoperative MR, pre-resection ultrasound, and post-resection ultrasound images of neurosurgery. Rivaz H, Collins DL 25373447
PERFORM
33 REtroSpective Evaluation of Cerebral Tumors (RESECT): A clinical database of pre-operative MRI and intra-operative ultrasound in low-grade glioma surgeries. Xiao Y, Fortin M, Unsgård G, Rivaz H, Reinertsen I 28391601
PERFORM
34 Evaluation of an automated thresholding algorithm for the quantification of paraspinal muscle composition from MRI images. Fortin M, Omidyeganeh M, Battié MC, Ahmad O, Rivaz H 28532491
PERFORM
35 Multimodal 18F-Fluciclovine PET/MRI and Ultrasound-Guided Neurosurgery of an Anaplastic Oligodendroglioma. Karlberg A, Berntsen EM, Johansen H, Myrthue M, Skjulsvik AJ, Reinertsen I, Esmaeili M, Dai HY, Xiao Y, Rivaz H, Borghammer P, Solheim O, Eikenes L 28844925
PERFORM
36 Nonlinear deformation of tractography in ultrasound-guided low-grade gliomas resection. Xiao Y, Eikenes L, Reinertsen I, Rivaz H 29299739
PERFORM
37 Intra-operative Video Characterization of Carotid Artery Pulsation Patterns in Case Series with Post-endarterectomy Hypertension and Hyperperfusion Syndrome. Xiao Y, Rivaz H, Kasuya H, Yokosako S, Mindru C, Teitelbaum J, Sirhan D, Sinclair D, Angle M, Lo BWY 29322480
PERFORM
38 Correction to: Nonlinear deformation of tractography in ultrasound-guided low-grade gliomas resection. Xiao Y, Eikenes L, Reinertsen I, Rivaz H 29392538
PERFORM
39 High-Dynamic-Range Ultrasound: Application for Imaging Tendon Pathology. Xiao Y, Boily M, Hashemi HS, Rivaz H 29628224
PERFORM
40 Population-averaged MRI atlases for automated image processing and assessments of lumbar paraspinal muscles. Xiao Y, Fortin M, Battié MC, Rivaz H 30051147
PERFORM
41 ARENA: Inter-modality affine registration using evolutionary strategy. Masoumi N, Xiao Y, Rivaz H 30535826
PERFORM
42 Ultrasonography of multifidus muscle morphology and function in ice hockey players with and without low back pain. Fortin M, Rizk A, Frenette S, Boily M, Rivaz H 30897493
PERFORM

 

Title:Evaluation of an automated thresholding algorithm for the quantification of paraspinal muscle composition from MRI images.
Authors:Fortin MOmidyeganeh MBattié MCAhmad ORivaz H
Link:https://www.ncbi.nlm.nih.gov/pubmed/28532491?dopt=Abstract
DOI:10.1186/s12938-017-0350-y
Publication:Biomedical engineering online
Keywords:Automated algorithmErector spinaeFatty infiltrationMagnetic resonance imagingMultifidusParaspinal muscle
PMID:28532491 Category:Biomed Eng Online Date Added:2019-04-15
Dept Affiliation: PERFORM
1 PERFORM Centre, Concordia University, 7200 Sherbrooke W, Montreal, QC, H4B 1R6, Canada.
2 Department of Electrical Engineering, Engineering, Computer Science and Visual Arts Integrated Complex, Concordia University, 1515 Ste-Catherine W. Street, Montreal, QC, H3G 2W1, Canada.
3 Common Spinal Disorders Research Group, Faculty of Rehabilitation Medicine University of Alberta, 8205-114 Street, Edmonton, AB, T6G 2G4, Canada.
4 PERFORM Centre, Concordia University, 7200 Sherbrooke W, Montreal, QC, H4B 1R6, Canada. hrivaz@ece.concordia.ca.
5 Department of Electrical Engineering, Engineering, Computer Science and Visual Arts Integrated Complex, Concordia University, 1515 Ste-Catherine W. Street, Montreal, QC, H3G 2W1, Canada. hrivaz@ece.concordia.ca.

Description:

Evaluation of an automated thresholding algorithm for the quantification of paraspinal muscle composition from MRI images.

Biomed Eng Online. 2017 May 22;16(1):61

Authors: Fortin M, Omidyeganeh M, Battié MC, Ahmad O, Rivaz H

Abstract

BACKGROUND: The imaging assessment of paraspinal muscle morphology and fatty infiltration has gained considerable attention in the past decades, with reports suggesting an association between muscle degenerative changes and low back pain (LBP). To date, qualitative and quantitative approaches have been used to assess paraspinal muscle composition. Though highly reliable, manual thresholding techniques are time consuming and not always feasible in a clinical setting. The tedious and rater-dependent nature of such manual thresholding techniques provides the impetus for the development of automated or semi-automated segmentation methods. The purpose of the present study was to develop and evaluate an automated thresholding algorithm for the assessment of paraspinal muscle composition. The reliability and validity of the muscle measurements using the new automated thresholding algorithm were investigated through repeated measurements and comparison with measurements from an established, highly reliable manual thresholding technique.

METHODS: Magnetic resonance images of 30 patients with LBP were randomly selected cohort of patients participating in a project on commonly diagnosed lumbar pathologies in patients attending spine surgeon clinics. A series of T2-weighted MR images were used to train the algorithm; preprocessing techniques including adaptive histogram equalization method image adjustment scheme were used to enhance the quality and contrast of the images. All muscle measurements were repeated twice using a manual thresholding technique and the novel automated thresholding algorithm, from axial T2-weigthed images, at least 5 days apart. The rater was blinded to all earlier measurements. Inter-method agreement and intra-rater reliability for each measurement method were assessed. The study did not received external funding and the authors have no disclosures.

RESULTS: There was excellent agreement between the two methods with inter-method reliability coefficients (intraclass correlation coefficients) varying from 0.79 to 0.99. Bland and Altman plots further confirmed the agreement between the two methods. Intra-rater reliability and standard error of measurements were comparable between methods, with reliability coefficient varying between 0.95 and 0.99 for the manual thresholding and 0.97-0.99 for the automated algorithm.

CONCLUSION: The proposed automated thresholding algorithm to assess paraspinal muscle size and composition measurements was highly reliable, with excellent agreement with the reference manual thresholding method.

PMID: 28532491 [PubMed - indexed for MEDLINE]





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