Keyword search (4,164 papers available)

"Walsh DA" Authored Publications:

Title Authors PubMed ID
1 Eutrophication and Warming Drive Algal Community Shifts in Synchronised Time Series of Experimental Lakes Garner RE; Taranu ZE; Higgins SN; Paterson MJ; Gregory-Eaves I; Walsh DA; 40704779
BIOLOGY
2 Water Quality and Land Use Shape Bacterial Communities Across 621 Canadian Lakes Onana VE; Beisner BE; Walsh DA; 39868666
BIOLOGY
3 Vulnerability of Arctic Ocean microbial eukaryotes to sea ice loss Jackson VLN; Grevesse T; Kilias ES; Onda DFL; Young KF; Allen MJ; Walsh DA; Lovejoy C; Monier A; 39572565
BIOLOGY
4 A genome catalogue of mercury-methylating bacteria and archaea from sediments of a boreal river facing human disturbances Lawruk-Desjardins C; Storck V; Ponton DE; Amyot M; Walsh DA; 38922750
BIOLOGY
5 A multiyear time series (2004-2012) of bacterial and archaeal community dynamics in a changing Arctic Ocean Kraemer SA; Ramachandran A; Onana VE; Li WKW; Walsh DA; 38282643
BIOLOGY
6 Publisher Correction: A genome catalogue of lake bacterial diversity and its drivers at continental scale Garner RE; Kraemer SA; Onana VE; Fradette M; Varin MP; Huot Y; Walsh DA; 37821571
BIOLOGY
7 A genome catalogue of lake bacterial diversity and its drivers at continental scale Garner RE; Kraemer SA; Onana VE; Fradette M; Varin MP; Huot Y; Walsh DA; 37524802
BIOLOGY
8 Geospatial analysis reveals a hotspot of fecal bacteria in Canadian prairie lakes linked to agricultural non-point sources Oliva A; Onana VE; Garner RE; Kraemer SA; Fradette M; Walsh DA; Huot Y; 36653256
BIOLOGY
9 Degradation pathways for organic matter of terrestrial origin are widespread and expressed in Arctic Ocean microbiomes Grevesse T; Guéguen C; Onana VE; Walsh DA; 36566218
BIOLOGY
10 A resistome survey across hundreds of freshwater bacterial communities reveals the impacts of veterinary and human antibiotics use Kraemer SA; Barbosa da Costa N; Oliva A; Huot Y; Walsh DA; 36338036
BIOLOGY
11 Comparing microscopy and DNA metabarcoding techniques for identifying cyanobacteria assemblages across hundreds of lakes MacKeigan PW; Garner RE; Monchamp MÈ; Walsh DA; Onana VE; Kraemer SA; Pick FR; Beisner BE; Agbeti MD; da Costa NB; Shapiro BJ; Gregory-Eaves I; 35287928
BIOLOGY
12 Rethinking microbial infallibility in the metagenomics era O' Malley MA; Walsh DA; 34160589
BIOLOGY
13 A Novel Freshwater to Marine Evolutionary Transition Revealed within Methylophilaceae Bacteria from the Arctic Ocean Ramachandran A; McLatchie S; Walsh DA; 34154421
BIOLOGY
14 Role of organic matter and microbial communities in mercury retention and methylation in sediments near run-of-river hydroelectric dams. Millera Ferriz L, Ponton DE, Storck V, Leclerc M, Bilodeau F, Walsh DA, Amyot M 33609815
BIOLOGY
15 Sediment Metagenomes as Time Capsules of Lake Microbiomes. Garner RE; Gregory-Eaves I; Walsh DA; 33148818
BIOLOGY
16 A large-scale assessment of lakes reveals a pervasive signal of land use on bacterial communities. Kraemer SA, Barbosa da Costa N, Shapiro BJ, Fradette M, Huot Y, Walsh DA 32770118
BIOLOGY
17 Modelling Free-Living and Particle-Associated Bacterial Assemblages across the Deep and Hypoxic Lower St. Lawrence Estuary. Cui TT, Dawson TJ, McLatchie S, Dunn K, Bielawski J, Walsh DA 32434843
BIOLOGY
18 Diversity and biogeography of SAR11 bacteria from the Arctic Ocean. Kraemer S, Ramachandran A, Colatriano D, Lovejoy C, Walsh DA 31501503
BIOLOGY
19 The NSERC Canadian Lake Pulse Network: A national assessment of lake health providing science for water management in a changing climate. Huot Y, Brown CA, Potvin G, Antoniades D, Baulch HM, Beisner BE, Bélanger S, Brazeau S, Cabana H, Cardille JA, Del Giorgio PA, Gregory-Eaves I, Fortin MJ, Lang AS, Laurion I, Maranger R, Prairie YT, Rusak JA, Segura PA, Siron R, Smol JP, Vinebrooke RD, Walsh DA 31419692
BIOLOGY
20 Genomic evidence for the degradation of terrestrial organic matter by pelagic Arctic Ocean Chloroflexi bacteria. Colatriano D, Tran PQ, Guéguen C, Williams WJ, Lovejoy C, Walsh DA 30271971
BIOLOGY
21 BioMiCo: a supervised Bayesian model for inference of microbial community structure. Shafiei M, Dunn KA, Boon E, MacDonald SM, Walsh DA, Gu H, Bielawski JP 25774293
BIOLOGY
22 A compendium of multi-omic sequence information from the Saanich Inlet water column. Hawley AK, Torres-Beltrán M, Zaikova E, Walsh DA, Mueller A, Scofield M, Kheirandish S, Payne C, Pakhomova L, Bhatia M, Shevchuk O, Gies EA, Fairley D, Malfatti SA, Norbeck AD, Brewer HM, Pasa-Tolic L, Del Rio TG, Suttle CA, Tringe S, Hallam SJ 29087368
BIOLOGY
23 A compendium of geochemical information from the Saanich Inlet water column. Torres-Beltrán M, Hawley AK, Capelle D, Zaikova E, Walsh DA, Mueller A, Scofield M, Payne C, Pakhomova L, Kheirandish S, Finke J, Bhatia M, Shevchuk O, Gies EA, Fairley D, Michiels C, Suttle CA, Whitney F, Crowe SA, Tortell PD, Hallam SJ 29087371
BIOLOGY
24 Microbial life under ice: Metagenome diversity and in situ activity of Verrucomicrobia in seasonally ice-covered Lakes. Tran P, Ramachandran A, Khawasik O, Beisner BE, Rautio M, Huot Y, Walsh DA 29921005
BIOLOGY
25 Progress and Challenges in Ocean Metaproteomics and Proposed Best Practices for Data Sharing. Saito MA, Bertrand EM, Duffy ME, Gaylord DA, Held NA, Hervey WJ, Hettich RL, Jagtap PD, Janech MG, Kinkade DB, Leary DH, McIlvin MR, Moore EK, Morris RM, Neely BA, Nunn BL, Saunders JK, Shepherd AI, Symmonds NI, Walsh DA 30702898
BIOLOGY
26 Annual nitrification dynamics in a seasonally ice-covered lake. Massé S, Botrel M, Walsh DA, Maranger R 30893339
BIOLOGY
27 Author Correction: A compendium of geochemical information from the Saanich Inlet water column. Torres-Beltrán M, Hawley AK, Capelle D, Zaikova E, Walsh DA, Mueller A, Scofield M, Payne C, Pakhomova L, Kheirandish S, Finke J, Bhatia M, Shevchuk O, Gies EA, Fairley D, Michiels C, Suttle CA, Whitney F, Crowe SA, Tortell PD, Hallam SJ 30647409
BIOLOGY

 

Title:Annual nitrification dynamics in a seasonally ice-covered lake.
Authors:Massé SBotrel MWalsh DAMaranger R
Link:https://www.ncbi.nlm.nih.gov/pubmed/30893339?dopt=Abstract
Publication:
Keywords:
PMID:30893339 Category:PLoS One Date Added:2019-06-07
Dept Affiliation: BIOLOGY
1 Groupe de recherche interuniversitaire en limnologie, Département de sciences biologiques, Université de Montréal, Montréal, Québec, Canada.
2 Groupe de recherche interuniversitaire en limnologie, Department of Biology, Concordia University, Montréal, Québec, Canada.

Description:

Annual nitrification dynamics in a seasonally ice-covered lake.

PLoS One. 2019;14(3):e0213748

Authors: Massé S, Botrel M, Walsh DA, Maranger R

Abstract

We investigated the variability in ammonia oxidation (AO) rates and the presence of ammonia-oxidizing archaea and bacteria (AOB and AOA) over an annual cycle in the water column of a small, seasonnally ice covered, temperate shield lake. AO, the first step of nitrification, was measured in situ using 15N-labelled ammonium (NH4+) at 1% and 10% of photosynthetic active radiation during day and at the same depths during night. AO was active across seasons and light levels, ranging from undetectable to 333 nmol L-1 d-1 with peak activity in winter under ice cover. NH4+ concentration was the single most important positive predictor of AO rates. High NH4+ concentrations and reduced chlorophyll a concentrations under ice, which favoured AO, were coherent with high nitrate concentrations and super saturation in nitrous oxide. When targeting the ammonia monooxygenase (amoA) gene in samples from the photic zone, we found AOA to be omnipresent throughout the year while AOB were observed predominantly during winter. Our results demonstrate that AO is an ongoing process in sunlit surface waters of temperate lakes and at all seasons with pronounced nitrification activity observed during winter under ice. The combination of high NH4+ concentrations due to fall overturn, reduced light availability that limited phytoplankton competition, and the presence of AOB together with AOA apparently favoured these elevated rates under ice. We suggest that lake ice could be a control point for nitrification in oligotrophic temperate shield lakes, characterized as a moment and place that exerts disproportionate influence on the biogeochemical behaviour of ecosystems.

PMID: 30893339 [PubMed - in process]





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