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Concordia Publications:

Title Authors PubMed ID
1 Class imbalance should not throw you off balance: Choosing the right classifiers and performance metrics for brain decoding with imbalanced data Thölke P; Mantilla-Ramos YJ; Abdelhedi H; Maschke C; Dehgan A; Harel Y; Kemtur A; Mekki Berrada L; Sahraoui M; Young T; Bellemare Pépin A; El Khantour C; Landry M; Pascarella A; Hadid V; Combrisson E; O' Byrne J; Jerbi K; 37385392
IMAGING
2 A dataset of multi-contrast unbiased average MRI templates of a Parkinson's disease population Madge V; Fonov VS; Xiao Y; Zou L; Jackson C; Postuma RB; Dagher A; Fon EA; Collins DL; 37213552
IMAGING
3 Primary and Secondary Progressive Aphasia in Posterior Cortical Atrophy Brodeur C; Belley É; Deschênes LM; Enriquez-Rosas A; Hubert M; Guimond A; Bilodeau J; Soucy JP; Macoir J; 35629330
IMAGING
4 Associations of the BDNF Val66Met Polymorphism With Body Composition, Cardiometabolic Risk Factors, and Energy Intake in Youth With Obesity: Findings From the HEARTY Study Goldfield GS; Walsh J; Sigal RJ; Kenny GP; Hadjiyannakis S; De Lisio M; Ngu M; Prud' homme D; Alberga AS; Doucette S; Goldfield DB; Cameron JD; 34867148
IMAGING
5 The BigBrainWarp toolbox for integration of BigBrain 3D histology with multimodal neuroimaging Paquola C; Royer J; Lewis LB; Lepage C; Glatard T; Wagstyl K; DeKraker J; Toussaint PJ; Valk SL; Collins DL; Khan A; Amunts K; Evans AC; Dickscheid T; Bernhardt BC; 34431476
IMAGING
6 Lateral Position-Dependent Velocity Estimation Error in Plane-Wave Doppler Ultrasound Systems Wei L; Williams R; Loupas T; Helfield B; Burns PN; 34006440
IMAGING
7 Tools and Techniques for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2)/COVID-19 Detection Safiabadi Tali SH; LeBlanc JJ; Sadiq Z; Oyewunmi OD; Camargo C; Nikpour B; Armanfard N; Sagan SM; Jahanshahi-Anbuhi S; 33980687
IMAGING
8 Comparing perturbation models for evaluating stability of neuroimaging pipelines. Kiar G, de Oliveira Castro P, Rioux P, Petit E, Brown ST, Evans AC, Glatard T 32831546
IMAGING
9 Two-stage ultrasound image segmentation using U-Net and test time augmentation. Amiri M; Brooks R; Behboodi B; Rivaz H; 32350786
IMAGING
10 BOLD signal physiology: Models and applications. Gauthier CJ, Fan AP 29544818
IMAGING
11 Exploring the alpha desynchronization hypothesis in resting state networks with intracranial electroencephalography and wiring cost estimates. Gómez-Ramírez J, Freedman S, Mateos D, Pérez Velázquez JL, Valiante TA 29142213
IMAGING
12 Dance and music share gray matter structural correlates. Karpati FJ, Giacosa C, Foster NEV, Penhune VB, Hyde KL 27923638
IMAGING
13 Cyberinfrastructure for Open Science at the Montreal Neurological Institute. Das S, Glatard T, Rogers C, Saigle J, Paiva S, MacIntyre L, Safi-Harab M, Rousseau ME, Stirling J, Khalili-Mahani N, MacFarlane D, Kostopoulos P, Rioux P, Madjar C, Lecours-Boucher X, Vanamala S, Adalat R, Mohaddes Z, Fonov VS, Milot S, Leppert I, Degroot C, Durcan TM, Campbell T, Moreau J, Dagher A, Collins DL, Karamchandani J, Bar-Or A, Fon EA, Hoge R, Baillet S, Rouleau G, Evans AC 28111547
IMAGING
14 Best practices in data analysis and sharing in neuroimaging using MRI. Nichols TE, Das S, Eickhoff SB, Evans AC, Glatard T, Hanke M, Kriegeskorte N, Milham MP, Poldrack RA, Poline JB, Proal E, Thirion B, Van Essen DC, White T, Yeo BT 28230846
IMAGING
15 Neuroimaging tests for clinical psychiatry: Are we there yet? Leyton M, Kennedy SH 28639935
IMAGING
16 Experimental Investigation of Left Ventricular Flow Patterns After Percutaneous Edge-to-Edge Mitral Valve Repair. Jeyhani M, Shahriari S, Labrosse M 29168199
IMAGING
17 The first MICCAI challenge on PET tumor segmentation. Hatt M, Laurent B, Ouahabi A, Fayad H, Tan S, Li L, Lu W, Jaouen V, Tauber C, Czakon J, Drapejkowski F, Dyrka W, Camarasu-Pop S, Cervenansky F, Girard P, Glatard T, Kain M, Yao Y, Barillot C, Kirov A, Visvikis D 29268169
IMAGING
18 Cluster based statistical feature extraction method for automatic bleeding detection in wireless capsule endoscopy video. Ghosh T, Fattah SA, Wahid KA, Zhu WP, Ahmad MO 29407997
IMAGING
19 Muscle Mass and Mortality After Cardiac Transplantation. Bibas L, Saleh E, Al-Kharji S, Chetrit J, Mullie L, Cantarovich M, Cecere R, Giannetti N, Afilalo J 29877924
IMAGING
20 Efficacy of Auditory versus Motor Learning for Skilled and Novice Performers. Brown RM, Penhune VB 30156505
IMAGING

 

Title:Cluster based statistical feature extraction method for automatic bleeding detection in wireless capsule endoscopy video.
Authors:Ghosh TFattah SAWahid KAZhu WPAhmad MO
Link:https://www.ncbi.nlm.nih.gov/pubmed/29407997?dopt=Abstract
DOI:10.1016/j.compbiomed.2017.12.014
Publication:Computers in biology and medicine
Keywords:Bleeding detectionBleeding zone delineationFeature extractionUnsupervised clusteringWireless capsule endoscopy
PMID:29407997 Category:Comput Biol Med Date Added:2019-06-20
Dept Affiliation: IMAGING
1 Dept. of Electrical and Electronic Engineering, Bangladesh University of Engineering and Technology, Dhaka, Bangladesh.
2 Dept. of Electrical and Electronic Engineering, Bangladesh University of Engineering and Technology, Dhaka, Bangladesh. Electronic address: fattah@eee.buet.ac.bd.
3 Dept. of Electrical and Computer Engineering, University of Saskatchewan, Saskatoon, Canada.
4 Dept. of Electrical and Computer Engineering, Concordia University, Montreal, Canada.

Description:

Cluster based statistical feature extraction method for automatic bleeding detection in wireless capsule endoscopy video.

Comput Biol Med. 2018 03 01;94:41-54

Authors: Ghosh T, Fattah SA, Wahid KA, Zhu WP, Ahmad MO

Abstract

Wireless capsule endoscopy (WCE) is capable of demonstrating the entire gastrointestinal tract at an expense of exhaustive reviewing process for detecting bleeding disorders. The main objective is to develop an automatic method for identifying the bleeding frames and zones from WCE video. Different statistical features are extracted from the overlapping spatial blocks of the preprocessed WCE image in a transformed color plane containing green to red pixel ratio. The unique idea of the proposed method is to first perform unsupervised clustering of different blocks for obtaining two clusters and then extract cluster based features (CBFs). Finally, a global feature consisting of the CBFs and differential CBF is used to detect bleeding frame via supervised classification. In order to handle continuous WCE video, a post-processing scheme is introduced utilizing the feature trends in neighboring frames. The CBF along with some morphological operations is employed to identify bleeding zones. Based on extensive experimentation on several WCE videos, it is found that the proposed method offers significantly better performance in comparison to some existing methods in terms of bleeding detection accuracy, sensitivity, specificity and precision in bleeding zone detection. It is found that the bleeding detection performance obtained by using the proposed CBF based global feature is better than the feature extracted from the non-clustered image. The proposed method can reduce the burden of physicians in investigating WCE video to detect bleeding frame and zone with a high level of accuracy.

PMID: 29407997 [PubMed - indexed for MEDLINE]





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