Keyword search (4,163 papers available)

"Biosensor" Keyword-tagged Publications:

Title Authors PubMed ID
1 A Bacteroides synthetic biology toolkit to build an in vivo malabsorption biosensor McCallum G; Burckhardt JC; He J; Hong A; Potvin-Trottier L; Tropini C; 41610848
BIOLOGY
2 Wearable biosensors: A comprehensive overview Wu KY; Su ME; Kim Y; Nguyen L; Marchand M; Tran SD; 40683741
ENCS
3 Research Trends in the Development of Block Copolymer-Based Biosensing Platforms Chung YH; Oh JK; 39590001
CHEMBIOCHEM
4 Functional and structural characterization of an IclR family transcription factor for the development of dicarboxylic acid biosensors Pham C; Nasr MA; Skarina T; Di Leo R; Kwan DH; Martin VJJ; Stogios PJ; Mahadevan R; Savchenko A; 38696354
BIOLOGY
5 Advancement in Biosensor Technologies of 2D MaterialIntegrated with Cellulose-Physical Properties Ramezani G; Stiharu I; van de Ven TGM; Nerguizian V; 38258201
ENCS
6 A Synthetic Biosensor for Detecting Putrescine in Beef Samples Selim AS; Perry JM; Nasr MA; Pimprikar JM; Shih SCC; 36356104
BIOLOGY
7 A Versatile Transcription Factor Biosensor System Responsive to Multiple Aromatic and Indole Inducers Nasr MA; Timmins LR; Martin VJJ; Kwan DH; 35316041
CHEMBIOCHEM
8 Defective GaAs nanoribbon-based biosensor for lung cancer biomarkers: a DFT study Tarun T; Singh P; Kaur H; Walia GK; Randhawa DKK; Choudhary BC; 34459994
ENCS
9 Seeing is believing: tools to study the role of Rho GTPases during cytokinesis Koh SP; Pham NP; Piekny A; 34405757
BIOLOGY
10 Recent Advances of DNA Tetrahedra for Therapeutic Delivery and Biosensing. Copp W, Pontarelli A, Wilds CJ 33506614
CHEMBIOCHEM
11 Finite Element Modelling of Bandgap Engineered Graphene FET with the Application in Sensing Methanethiol Biomarker. Singh P, Abedini Sohi P, Kahrizi M 33467459
ENCS

 

Title:Functional and structural characterization of an IclR family transcription factor for the development of dicarboxylic acid biosensors
Authors:Pham CNasr MASkarina TDi Leo RKwan DHMartin VJJStogios PJMahadevan RSavchenko A
Link:https://pubmed.ncbi.nlm.nih.gov/38696354/
DOI:10.1111/febs.17149
Publication:The FEBS journal
Keywords:IclR familyPcaRbiosensorcrystal structuretranscription factor
PMID:38696354 Category: Date Added:2024-05-02
Dept Affiliation: BIOLOGY
1 Department of Chemical Engineering and Applied Chemistry, University of Toronto, Canada.
2 Centre for Applied Synthetic Biology, Concordia University, Montreal, Canada.
3 Department of Biology, Concordia University, Montreal, Canada.
4 PROTEO, Quebec Network for Research on Protein Function, Structure, and Engineering, Canada.
5 Department of Chemistry and Biochemistry, Concordia University, Montreal, Canada.
6 The Institute of Biomedical Engineering, University of Toronto, Canada.
7 Department of Microbiology, Immunology and Infectious Diseases, University of Calgary, Canada.

Description:

Prokaryotic transcription factors (TFs) regulate gene expression in response to small molecules, thus representing promising candidates as versatile small molecule-detecting biosensors valuable for synthetic biology applications. The engineering of such biosensors requires thorough in vitro and in vivo characterization of TF ligand response as well as detailed molecular structure information. In this work, we functionally and structurally characterize the Pca regulon regulatory protein (PcaR) transcription factor belonging to the IclR transcription factor family. Here, we present in vitro functional analysis of the ligand profile of PcaR and the construction of genetic circuits for the characterization of PcaR as an in vivo biosensor in the model eukaryote Saccharomyces cerevisiae. We report the crystal structures of PcaR in the apo state and in complex with one of its ligands, succinate, which suggests the mechanism of dicarboxylic acid recognition by this transcription factor. This work contributes key structural and functional insights enabling the engineering of PcaR for dicarboxylic acid biosensors, in addition to providing more insights into the IclR family of regulators.





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