Keyword search (4,163 papers available)

"Degradation" Keyword-tagged Publications:

Title Authors PubMed ID
1 Laboratory-scale simulation study on the bioremediation of marine oil pollution by phosphate-solubilizing bacteria Bacillus subtilis PSB-1 Du Z; Li Z; Chen X; Liu M; Feng L; Li Q; Chen Z; Chen Q; 41707285
ENCS
2 Synthesis and Acidic pH-Responsive Disassembly of Dual-Location Shell-Sheddable/Core-Degradable Block Copolymer Nanoassemblies and Their Controlled Drug Delivery Andrade-Gagnon B; Casillas-Popova SN; Shamekhi M; Bairagi K; Peslherbe GH; Oh JK; 41524627
CHEMBIOCHEM
3 Stability of Acetals/Ketals Under Controlled Radical and Ring Opening Polymerization Andrade-Gagnon B; Casillas-Popova SN; Oh JK; 40614241
CHEMBIOCHEM
4 Enhanced biodegradation of crude oil by phosphate-solubilizing bacteria Bacillus subtilis PSB-1: Overcoming soluble phosphorus deficiency Wang X; Du Z; Li Z; Liu M; Mu J; Feng L; Chen Z; Chen Q; 40609441
ENCS
5 Application of machine learning for predicting the incubation period of water droplet erosion in metals AlHammad K; Medraj M; Tembely M; 40612685
ENCS
6 Konjac glucomannan (KGM) aerogel immobilized microalgae: A new way for marine oil spills remediation Wang X; Du Z; Song Z; Liu M; He P; Feng L; Chen Z; Chen Q; 40381443
ENCS
7 Photocatalytic innovations in PFAS removal: Emerging trends and advances Tabatabaei M; Cho DW; Fahad S; Jeong DW; Hwang JH; 40315548
ENCS
8 Radiation tolerance and biodegradation performance of a marine bacterium Acinetobacter sp. Y9 in radioactive composite oil-contaminated wastewater Yan J; Luo Q; Zhu B; Chen Z; Chen Q; 39806541
ENCS
9 Insights from multiple stable isotopes (C, N, Cl) into the photodegradation of herbicides atrazine and metolachlor Levesque-Vargas M; Ohlund L; Sleno L; Gélinas Y; Höhener P; Ponsin V; 39716600
CHEMBIOCHEM
10 The degradation of polylactic acid face mask components in different environments Lyu L; Bagchi M; Ng KTW; Markoglou N; Chowdhury R; An C; Chen Z; Yang X; 39378804
ENCS
11 pH-Responsive Degradable Electro-Spun Nanofibers Crosslinked via Boronic Ester Chemistry for Smart Wound Dressings Casillas-Popova SN; Lokuge ND; Andrade-Gagnon B; Chowdhury FR; Skinner CD; Findlay BL; Oh JK; 38989606
BIOLOGY
12 Design, Synthesis, and Acid-Responsive Disassembly of Shell-Sheddable Block Copolymer Labeled with Benzaldehyde Acetal Junction Andrade-Gagnon B; Casillas-Popova SN; Jazani AM; Oh JK; 38499007
CHEMBIOCHEM
13 Janus Micromotors for Photophoretic Motion and Photon Upconversion Applications Using a Single Near-Infrared Wavelength Mena-Giraldo P; Kaur M; Maurizio SL; Mandl GA; Capobianco JA; 38197400
CHEMBIOCHEM
14 Effects of electron acceptors and donors on anaerobic biodegradation of PAHs in marine sediments Chen Q; Li Z; Chen Y; Liu M; Yang Q; Zhu B; Mu J; Feng L; Chen Z; 38113802
ENCS
15 Towards environmentally sustainable management: A review on the generation, degradation, and recycling of polypropylene face mask waste Lyu L; Bagchi M; Markoglou N; An C; Peng H; Bi H; Yang X; Sun H; 37742382
ENCS
16 Comparative Analysis of Enzyme Production Patterns of Lignocellulose Degradation of Two White Rot Fungi: Obba rivulosa and Gelatoporia subvermispora Marinovíc M; Di Falco M; Aguilar Pontes MV; Gorzsás A; Tsang A; de Vries RP; Mäkelä MR; Hildén K; 35892327
CSFG
17 Perfluorocarbon Nanodroplets for Dual Delivery with Ultrasound/GSH-Responsive Release of Model Drug and Passive Release of Nitric Oxide Choi M; Jazani AM; Oh JK; Noh SM; 35683912
CHEMBIOCHEM
18 Hypersaline Pore Water in Gulf of Mexico Beaches Prevented Efficient Biodegradation of Deepwater Horizon Beached Oil Geng X; Khalil CA; Prince RC; Lee K; An C; Boufadel MC; 34617733
ENCS
19 Sustainable chemical processing of flowing wastewater through microwave energy Siddique F; Mirzaei A; Gonzalez-Cortes S; Slocombe D; Al-Megren HA; Xiao T; Rafiq MA; Edwards PP; 34474383
PHYSICS
20 Kinetic and reaction mechanism of generated by-products in a photocatalytic oxidation reactor: Model development and validation Malayeri M; Lee CS; Niu J; Zhu J; Haghighat F; 34182424
ENCS
21 Imidazole-Mediated Dual Location Disassembly of Acid-Degradable Intracellular Drug Delivery Block Copolymer Nanoassemblies Jazani AM; Shetty C; Movasat H; Bawa KK; Oh JK; 34050688
CHEMBIOCHEM
22 Direct Polymerization Approach to Synthesize Acid-Degradable Block Copolymers Bearing Imine Pendants for Tunable pH-Sensitivity and Enhanced Release. Hu X, Oh JK 32964550
CHEMBIOCHEM
23 Reduction-Responsive Sheddable Carbon Nanotubes Dispersed in Aqueous Solution. An SY, Sun S, Oh JK 26890479
CNSR
24 Rab-Effector-Kinase Interplay Modulates Intralumenal Fragment Formation during Vacuole Fusion. Karim MA, McNally EK, Samyn DR, Mattie S, Brett CL 30269949
BIOLOGY
25 Transcriptome and exoproteome analysis of utilization of plant-derived biomass by Myceliophthora thermophila. Kolbusz MA, Di Falco M, Ishmael N, Marqueteau S, Moisan MC, Baptista CDS, Powlowski J, Tsang A 24881579
BIOLOGY
26 Closely related fungi employ diverse enzymatic strategies to degrade plant biomass. Benoit I, Culleton H, Zhou M, DiFalco M, Aguilar-Osorio G, Battaglia E, Bouzid O, Brouwer CPJM, El-Bushari HBO, Coutinho PM, Gruben BS, Hildén KS, Houbraken J, Barboza LAJ, Levasseur A, Majoor E, Mäkelä MR, Narang HM, Trejo-Aguilar B, van den Brink J, vanKuyk PA, Wiebenga A, McKie V, McCleary B, Tsang A, Henrissat B, de Vries RP 26236396
CSFG
27 Expression-based clustering of CAZyme-encoding genes of Aspergillus niger. Gruben BS, Mäkelä MR, Kowalczyk JE, Zhou M, Benoit-Gelber I, De Vries RP 29169319
CSFG
28 Genomic and exoproteomic diversity in plant biomass degradation approaches among Aspergilli Mäkelä MR; DiFalco M; McDonnell E; Nguyen TTM; Wiebenga A; Hildén K; Peng M; Grigoriev IV; Tsang A; de Vries RP; 30487660
CSFG
29 The presence of trace components significantly broadens the molecular response of Aspergillus niger to guar gum. Coconi Linares N, Di Falco M, Benoit-Gelber I, Gruben BS, Peng M, Tsang A, Mäkelä MR, de Vries RP 30797054
CSFG

 

Title:Comparative Analysis of Enzyme Production Patterns of Lignocellulose Degradation of Two White Rot Fungi: Obba rivulosa and Gelatoporia subvermispora
Authors:Marinovíc MDi Falco MAguilar Pontes MVGorzsás ATsang Ade Vries RPMäkelä MRHildén K
Link:https://pubmed.ncbi.nlm.nih.gov/35892327/
DOI:10.3390/biom12081017
Publication:Biomolecules
Keywords:CAZymesGelatoporia subvermisporaLC-MS/MSObba rivulosalignin biodegradationproteomewhite rot fungi
PMID:35892327 Category: Date Added:2022-07-27
Dept Affiliation: CSFG
1 Department of Microbiology, Faculty of Agriculture and Forestry, University of Helsinki, 00790 Helsinki, Finland.
2 Centre for Structural and Functional Genomics, Concordia University, Montréal, QC H4B 1R6, Canada.
3 Fungal Physiology, Westerdijk Fungal Biodiversity Institute & Fungal Molecular Physiology, Utrecht University, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands.
4 Department of Chemistry, Umeå University, 901 87 Umeå, Sweden.

Description:

The unique ability of basidiomycete white rot fungi to degrade all components of plant cell walls makes them indispensable organisms in the global carbon cycle. In this study, we analyzed the proteomes of two closely related white rot fungi, Obba rivulosa and Gelatoporia subvermispora, during eight-week cultivation on solid spruce wood. Plant cell wall degrading carbohydrate-active enzymes (CAZymes) represented approximately 5% of the total proteins in both species. A core set of orthologous plant cell wall degrading CAZymes was shared between these species on spruce suggesting a conserved plant biomass degradation approach in this clade of basidiomycete fungi. However, differences in time-dependent production of plant cell wall degrading enzymes may be due to differences among initial growth rates of these species on solid spruce wood. The obtained results provide insight into specific enzymes and enzyme sets that are produced during the degradation of solid spruce wood in these fungi. These findings expand the knowledge on enzyme production in nature-mimicking conditions and may contribute to the exploitation of white rot fungi and their enzymes for biotechnological applications.





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