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PubMed Publications| Keyword search (4,164 papers available) |  |
"Reproducibility" Keyword-tagged Publications:
| Title | Authors | PubMed ID | |
|---|---|---|---|
| 1 | MATES: A tool for appraising the completeness with which a meta-analysis has been reported | Morrison K; Pottier P; Pollo P; Ricolfi L; Williams C; Yang Y; Beillouin D; Cardoso SJ; Ferreira V; Gallagher B; Gan JL; Hao G; Keikha M; Kozlowsky-Suzuki B; Kiran Kumara TM; Latterini F; Leverkus AB; Macartney EL; Manrique SM; Martinig AR; Mizuno A; Nanayakkara S; Ntzani E; Ouédraogo DY; Pursell E; Simpson Z; Sleight H; Woon KS; Xia Z; Ghannad M; Grames E; Hennessy EA; IntHout J; Moher D; O' Dea RE; Page MJ; Whaley P; Lagisz M; Nakagawa S; | 41411971 BIOLOGY |
| 2 | Open-source platforms to investigate analytical flexibility in neuroimaging | Sanz-Robinson J; Wang M; McPherson B; Chatelain Y; Kennedy D; Glatard T; Poline JB; | 40800896 ENCS |
| 3 | Infants' Social Evaluation of Helpers and Hinderers: A Large-Scale, Multi-Lab, Coordinated Replication Study | Lucca K; Yuen F; Wang Y; Alessandroni N; Allison O; Alvarez M; Axelsson EL; Baumer J; Baumgartner HA; Bertels J; Bhavsar M; Byers-Heinlein K; Capelier-Mourguy A; Chijiiwa H; Chin CS; Christner N; Cirelli LK; Corbit J; Daum MM; Doan T; Dresel M; Exner A; Fei W; Forbes SH; Franchin L; Frank MC; Geraci A; Giraud M; Gornik ME; Wiesmann CG; Grossmann T; Hadley IM; Havron N; Henderson AME; Matzner EH; Immel BA; Jankiewicz G; Jedryczka W; Kanakogi Y; Kominsky JF; Lew-Williams C; Liberman Z; Liu L; Liu Y; Loeffler MT; Martin A; Mayor J; Meng X; Misiak M; Moreau D; Nencheva ML; Oña LS; Otálora Y; Paulus M; Pepe B; Pickron CB; Powell LJ; Proft M; Quinn AA; Rakoczy H; Reschke PJ; Roth-Hanania R; Rothmaler K; Schlegelmilch K; Schlingloff-Nemecz L; Schmuckler MA; Schuwerk T; Seehagen S; Sen HH; Shainy MR; Silvestri V; Soderstrom M; Sommerville J; Song HJ; Sorokowski P; Stutz SE; Su Y; Taborda-Osorio H; Tan AWM; Tatone D; Taylor-Partridge T; Tsang CKA; Urbanek A; Uzefovsky F; Visser I; Wertz AE; Williams M; Wolsey K; Wong TT; Woodward AM; Wu Y; Zeng Z; Zimmer L; Hamlin JK; | 39600132 PSYCHOLOGY |
| 4 | Establishing a framework for best practices for quality assurance and quality control in untargeted metabolomics | Mosley JD; Schock TB; Beecher CW; Dunn WB; Kuligowski J; Lewis MR; Theodoridis G; Ulmer Holland CZ; Vuckovic D; Wilson ID; Zanetti KA; | 38345679 CHEMBIOCHEM |
| 5 | Functional Synthetic Biology | Aldulijan I; Beal J; Billerbeck S; Bouffard J; Chambonnier G; Ntelkis N; Guerreiro I; Holub M; Ross P; Selvarajah V; Sprent N; Vidal G; Vignoni A; | 37073284 BIOLOGY |
| 6 | File-based localization of numerical perturbations in data analysis pipelines. | Salari A, Kiar G, Lewis L, Evans AC, Glatard T | 33269388 ENCS |
| 7 | Reproducibility of EEG-MEG fusion source analysis of interictal spikes: Relevance in presurgical evaluation of epilepsy. | Chowdhury RA, Pellegrino G, Aydin Ü, Lina JM, Dubeau F, Kobayashi E, Grova C | 29164737 PERFORM |
| Title: | Establishing a framework for best practices for quality assurance and quality control in untargeted metabolomics | ||||
| Authors: | Mosley JD, Schock TB, Beecher CW, Dunn WB, Kuligowski J, Lewis MR, Theodoridis G, Ulmer Holland CZ, Vuckovic D, Wilson ID, Zanetti KA | ||||
| Link: | https://pubmed.ncbi.nlm.nih.gov/38345679/ | ||||
| DOI: | 10.1007/s11306-023-02080-0 | ||||
| Publication: | Metabolomics : Official journal of the Metabolomic Society | ||||
| Keywords: | Guidance; Liquid chromatography-mass spectrometry (LC-MS); Quality assurance (QA); Quality control (QC); Reproducibility; Untargeted metabolomics; | ||||
| PMID: | 38345679 | Category: | Date Added: | 2024-02-12 | |
| Dept Affiliation: |
CHEMBIOCHEM
1 Center for Environmental Measurement and Modeling, Environmental Protection Agency, Athens, GA, 30605, USA. mosley.jonathan@epa.gov. 2 Chemical Sciences Division, National Institute of Standards and Technology (NIST), Charleston, SC, 29412, USA. 3 IROA Technologies, Chapel Hill, NC, USA. 4 Centre for Metabolomics Research, Department of Biochemistry, Cell and Systems Biology, Institute of Systems, Molecular and Integrative Biology, University of Liverpool, Liverpool, L69 7ZB, UK. 5 Neonatal Research Group, Health Research Institute La Fe, 46026, Valencia, Spain. 6 Life Sciences Mass Spectrometry Division, Bruker UK Limited, Coventry, CV4 8HZ, UK. 7 National Phenome Centre & Division of Systems Medicine, Department of Metabolism, Digestion & Reproduction, Imperial College London, London, W12 0NN, UK. 8 BIOMIC_Auth, Center for Interdisciplinary Research and Innovation (CIRI-AUTH), Aristotle University Thessaloniki, 57001, Thermi, Greece. 9 Eastern Laboratory, Office of Public Health Science (OPHS), Food Safety and Inspection Service (FSIS), Department of Agriculture (USDA), Athens, GA, 30605, USA. 10 Department of Chemistry and Biochemistry, Concordia University, Montreal, QC, H4B 1R6, Canada. 11 Division of Systems Medicine, Department of Metabolism Department of Metabolism, Digestion and Reproduction, Imperial College, London, W12 0NN, UK. 12 Office of Nutrition Research, Office of the Director, Division of Program Coordination, Planning, and Strategic Initiatives, National Institutes of Health, Bethesda, MD, USA. |
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Description: |
Background: Quality assurance (QA) and quality control (QC) practices are key tenets that facilitate study and data quality across all applications of untargeted metabolomics. These important practices will strengthen this field and accelerate its success. The Best Practices Working Group (WG) within the Metabolomics Quality Assurance and Quality Control Consortium (mQACC) focuses on community use of QA/QC practices and protocols and aims to identify, catalogue, harmonize, and disseminate current best practices in untargeted metabolomics through community-driven activities. Aim of review: A present goal of the Best Practices WG is to develop a working strategy, or roadmap, that guides the actions of practitioners and progress in the field. The framework in which mQACC operates promotes the harmonization and dissemination of current best QA/QC practice guidance and encourages widespread adoption of these essential QA/QC activities for liquid chromatography-mass spectrometry. Key scientific concepts of review: Community engagement and QA/QC information gathering activities have been occurring through conference workshops, virtual and in-person interactive forum discussions, and community surveys. Seven principal QC stages prioritized by internal discussions of the Best Practices WG have received participant input, feedback and discussion. We outline these stages, each involving a multitude of activities, as the framework for identifying QA/QC best practices. The ultimate planned product of these endeavors is a "living guidance" document of current QA/QC best practices for untargeted metabolomics that will grow and change with the evolution of the field. |
