Keyword search (4,164 papers available)

"Segmentation" Keyword-tagged Publications:

Title Authors PubMed ID
1 Towards user-centered interactive medical image segmentation in VR with an assistive AI agent Spiegler P; Harirpoush A; Xiao Y; 41509996
ENCS
2 MedCLIP-SAMv2: Towards universal text-driven medical image segmentation Koleilat T; Asgariandehkordi H; Rivaz H; Xiao Y; 40779830
ENCS
3 Exploring interaction paradigms for segmenting medical images in virtual reality Jones Z; Drouin S; Kersten-Oertel M; 40402355
ENCS
4 MRI as a viable alternative to CT for 3D surgical planning of Cavitary bone tumors Chae Y; Cheers GM; Kim M; Reidler P; Klein A; Fevens T; Holzapfel BM; Mayer-Wagner S; 40049253
ENCS
5 Open access segmentations of intraoperative brain tumor ultrasound images Behboodi B; Carton FX; Chabanas M; de Ribaupierre S; Solheim O; Munkvold BKR; Rivaz H; Xiao Y; Reinertsen I; 39047165
SOH
6 FishSegSSL: A Semi-Supervised Semantic Segmentation Framework for Fish-Eye Images Paul S; Patterson Z; Bouguila N; 38535151
ENCS
7 Impaired performance of rapid grip in people with Parkinson's disease and motor segmentation Rebecca J Daniels 38507858
PSYCHOLOGY
8 PILLAR: ParaspInaL muscLe segmentAtion pRoject - a comprehensive online resource to guide manual segmentation of paraspinal muscles from magnetic resonance imaging Anstruther M; Rossini B; Zhang T; Liang T; Xiao Y; Fortin M; 37996857
SOH
9 Compatible-domain Transfer Learning for Breast Cancer Classification with Limited Annotated Data Shamshiri MA; Krzyzak A; Kowal M; Korbicz J; 36758326
ENCS
10 Measures of motor segmentation from rapid isometric force pulses are reliable and differentiate Parkinson's disease from age-related slowing Howard SL; Grenet D; Bellumori M; Knight CA; 35768733
PSYCHOLOGY
11 Spoken Word Segmentation in First and Second Language: When ERP and Behavioral Measures Diverge Gilbert AC; Lee JG; Coulter K; Wolpert MA; Kousaie S; Gracco VL; Klein D; Titone D; Phillips NA; Baum SR; 34603133
PSYCHOLOGY
12 Sharp U-Net: Depthwise convolutional network for biomedical image segmentation Zunair H; Ben Hamza A; 34348214
ENCS
13 LUMINOUS database: lumbar multifidus muscle segmentation from ultrasound images Belasso CJ; Behboodi B; Benali H; Boily M; Rivaz H; Fortin M; 33097024
PERFORM
14 Two-stage ultrasound image segmentation using U-Net and test time augmentation. Amiri M; Brooks R; Behboodi B; Rivaz H; 32350786
IMAGING
15 Statistical learning of multiple speech streams: A challenge for monolingual infants. Benitez VL, Bulgarelli F, Byers-Heinlein K, Saffran JR, Weiss DJ 31444822
CONCORDIA
16 High resolution atlas of the venous brain vasculature from 7 T quantitative susceptibility maps. Huck J, Wanner Y, Fan AP, Jäger AT, Grahl S, Schneider U, Villringer A, Steele CJ, Tardif CL, Bazin PL, Gauthier CJ 31278570
PSYCHOLOGY
17 The first MICCAI challenge on PET tumor segmentation. Hatt M, Laurent B, Ouahabi A, Fayad H, Tan S, Li L, Lu W, Jaouen V, Tauber C, Czakon J, Drapejkowski F, Dyrka W, Camarasu-Pop S, Cervenansky F, Girard P, Glatard T, Kain M, Yao Y, Barillot C, Kirov A, Visvikis D 29268169
IMAGING
18 A dataset of multi-contrast population-averaged brain MRI atlases of a Parkinson׳s disease cohort. Xiao Y, Fonov V, Chakravarty MM, Beriault S, Al Subaie F, Sadikot A, Pike GB, Bertrand G, Collins DL 28491942
PERFORM

 

Title:Sharp U-Net: Depthwise convolutional network for biomedical image segmentation
Authors:Zunair HBen Hamza A
Link:https://pubmed.ncbi.nlm.nih.gov/34348214/
DOI:10.1016/j.compbiomed.2021.104699
Publication:Computers in biology and medicine
Keywords:Fully convolutional networkSemantic segmentationSharpening filterSkip connectionsU-Net
PMID:34348214 Category: Date Added:2021-08-05
Dept Affiliation: ENCS
1 Concordia Institute for Information Systems Engineering, Concordia University, Montreal, QC, Canada.
2 Concordia Institute for Information Systems Engineering, Concordia University, Montreal, QC, Canada. Electronic address: hamza@ciise.concordia.ca.

Description:

The U-Net architecture, built upon the fully convolutional network, has proven to be effective in biomedical image segmentation. However, U-Net applies skip connections to merge semantically different low- and high-level convolutional features, resulting in not only blurred feature maps, but also over- and under-segmented target regions. To address these limitations, we propose a simple, yet effective end-to-end depthwise encoder-decoder fully convolutional network architecture, called Sharp U-Net, for binary and multi-class biomedical image segmentation. The key rationale of Sharp U-Net is that instead of applying a plain skip connection, a depthwise convolution of the encoder feature map with a sharpening kernel filter is employed prior to merging the encoder and decoder features, thereby producing a sharpened intermediate feature map of the same size as the encoder map. Using this sharpening filter layer, we are able to not only fuse semantically less dissimilar features, but also to smooth out artifacts throughout the network layers during the early stages of training. Our extensive experiments on six datasets show that the proposed Sharp U-Net model consistently outperforms or matches the recent state-of-the-art baselines in both binary and multi-class segmentation tasks, while adding no extra learnable parameters. Furthermore, Sharp U-Net outperforms baselines that have more than three times the number of learnable parameters.





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