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"Tomography" Keyword-tagged Publications:

Title Authors PubMed ID
1 NIRSTORM: a Brainstorm extension dedicated to functional near-infrared spectroscopy data analysis, advanced 3D reconstructions, and optimal probe design Delaire É; Vincent T; Cai Z; Machado A; Hugueville L; Schwartz D; Tadel F; Cassani R; Bherer L; Lina JM; Pélégrini-Issac M; Grova C; 40375973
SOH
2 Sleep neuroimaging: Review and future directions Pereira M; Chen X; Paltarzhytskaya A; Pache?o Y; Muller N; Bovy L; Lei X; Chen W; Ren H; Song C; Lewis LD; Dang-Vu TT; Czisch M; Picchioni D; Duyn J; Peigneux P; Tagliazucchi E; Dresler M; 39940102
HKAP
3 Fractals in Neuroimaging Lahmiri S; Boukadoum M; Di Ieva A; 38468046
JMSB
4 Brain PET Imaging in Small Animals: Tracer Formulation, Data Acquisition, Image Reconstruction, and Data Analysis Bdair H; Kang MS; Ottoy J; Aliaga A; Kunach P; Singleton TA; Blinder S; Soucy JP; Leyton M; Rosa-Neto P; Kostikov A; 38006502
PERFORM
5 Bayesian workflow for the investigation of hierarchical classification models from tau-PET and structural MRI data across the Alzheimer's disease spectrum Belasso CJ; Cai Z; Bezgin G; Pascoal T; Stevenson J; Rahmouni N; Tissot C; Lussier F; Rosa-Neto P; Soucy JP; Rivaz H; Benali H; 37920382
PERFORM
6 Dosimetry of [18F]TRACK, the first PET tracer for imaging of TrkB/C receptors in humans Thiel A; Kostikov A; Ahn H; Daoud Y; Soucy JP; Blinder S; Jaworski C; Wängler C; Wängler B; Juengling F; Enger SA; Schirrmacher R; 37870640
PERFORM
7 Radiosynthesis and In Vivo Evaluation of Four Positron Emission Tomography Tracer Candidates for Imaging of Melatonin Receptors Bdair H; Singleton TA; Ross K; Jolly D; Kang MS; Aliaga A; Tuznik M; Kaur T; Yous S; Soucy JP; Massarweh G; Scott PJH; Koeppe R; Spadoni G; Bedini A; Rudko DA; Gobbi G; Benkelfat C; Rosa-Neto P; Brooks AF; Kostikov A; 35420022
PERFORM
8 Evaluation of a personalized functional near infra-red optical tomography workflow using maximum entropy on the mean Cai Z; Uji M; Aydin Ü; Pellegrino G; Spilkin A; Delaire É; Abdallah C; Lina JM; Grova C; 34342073
PERFORM
9 COVID-FACT: A Fully-Automated Capsule Network-Based Framework for Identification of COVID-19 Cases from Chest CT Scans Heidarian S; Afshar P; Enshaei N; Naderkhani F; Rafiee MJ; Babaki Fard F; Samimi K; Atashzar SF; Oikonomou A; Plataniotis KN; Mohammadi A; 34113843
ENCS
10 Topographical distribution of Aβ predicts progression to dementia in Aβ positive mild cognitive impairment Pascoal TA, Therriault J, Mathotaarachchi S, Kang MS, Shin M, Benedet AL, Chamoun M, Tissot C, Lussier F, Mohaddes S, Soucy JP, Massarweh G, Gauthier S, Rosa-Neto P, 32582834
PERFORM
11 Chronic Neuroleptic-Induced Parkinsonism Examined with Positron Emission Tomography. Galoppin M, Berroir P, Soucy JP, Suzuki Y, Lavigne GJ, Gagnon JF, Montplaisir JY, Stip E, Blanchet PJ 32353194
PERFORM
12 Development of "[11C]kits" for a fast, efficient and reliable production of carbon-11 labeled radiopharmaceuticals for Positron Emission Tomography. Jolly D, Hopewell R, Kovacevic M, Li QY, Soucy JP, Kostikov A 28038410
PERFORM
13 Visualization of SNARE-Mediated Organelle Membrane Hemifusion by Electron Microscopy. Mattie S, Kazmirchuk T, Mui J, Vali H, Brett CL 30317518
BIOLOGY
14 Brain perfusion during rapid-eye-movement sleep successfully identifies amnestic mild cognitive impairment. Brayet P, Petit D, Baril AA, Gosselin N, Gagnon JF, Soucy JP, Gauthier S, Kergoat MJ, Carrier J, Rouleau I, Montplaisir J 28522082
PERFORM
15 Optimal positioning of optodes on the scalp for personalized functional near-infrared spectroscopy investigations. Machado A, Cai Z, Pellegrino G, Marcotte O, Vincent T, Lina JM, Kobayashi E, Grova C 30107210
PERFORM
16 Metabotropic Glutamate Receptor Type 5 (mGluR5) Cortical Abnormalities in Focal Cortical Dysplasia Identified In Vivo With [11C]ABP688 Positron-Emission Tomography (PET) Imaging. DuBois JM, Rousset OG, Guiot MC, Hall JA, Reader AJ, Soucy JP, Rosa-Neto P, Kobayashi E 27578494
PERFORM
17 Altered Regional Cerebral Blood Flow in Idiopathic Hypersomnia. Boucetta S, Montplaisir J, Zadra A, Lachapelle F, Soucy JP, Gravel P, Dang-Vu TT 28958044
PERFORM
18 Impaired sensorimotor processing during complex gait precedes behavioral changes in middle-aged adults. Mitchell T, Starrs F, Soucy JP, Thiel A, Paquette C 30247510
PERFORM
19 Gesture-based registration correction using a mobile augmented reality image-guided neurosurgery system. Léger É, Reyes J, Drouin S, Collins DL, Popa T, Kersten-Oertel M 30800320
PERFORM

 

Title:NIRSTORM: a Brainstorm extension dedicated to functional near-infrared spectroscopy data analysis, advanced 3D reconstructions, and optimal probe design
Authors:Delaire ÉVincent TCai ZMachado AHugueville LSchwartz DTadel FCassani RBherer LLina JMPélégrini-Issac MGrova C
Link:https://pubmed.ncbi.nlm.nih.gov/40375973/
DOI:10.1117/1.NPh.12.2.025011
Publication:Neurophotonics
Keywords:advanced multimodal integrationconventional functional near-infrared spectroscopy analysisfunctional near-infrared spectroscopynear-infrared optical tomographyoptimal montagetoolbox
PMID:40375973 Category: Date Added:2025-05-16
Dept Affiliation: SOH
1 Concordia University, School of Health, PERFORM Centre, Montréal, Quebec, Canada.
2 Concordia University, Multimodal Functional Imaging Laboratory, Department of Physics, Montréal, Quebec, Canada.
3 Montreal Heart Institute, EPIC Center, Montréal, Quebec, Canada.
4 McGill University, Montreal Neurological Institute, Montreal, Quebec, Canada.
5 McGill University, Multimodal Functional Imaging Laboratory, Biomedical Engineering Department, Neurology and Neurosurgery Department, Montreal, Quebec, Canada.
6 Institut du Cerveau ICM, Centre MEG-EEG, Paris, France.
7 Inserm, CNRS, Centre de Recherche en Neurosciences de Lyon, Lyon, France.
8 Independent Research Engineer, Grenoble, France.
9 McGill University, Montreal Neurological Institute, McConnell Brain Imaging Centre, Montreal, Quebec, Canada.
10 Université de Montréal, Department of Medicine, Montréal, Quebec, Canada.
11 École de Technologie Supérieure, Electrical Engineering Department, Montréal,

Description:

Significance: Understanding the brain's complex functions requires multimodal approaches that combine data from various neuroimaging techniques. Functional near-infrared spectroscopy (fNIRS) offers valuable insights into hemodynamic responses, complementing other modalities such as electroencephalography (EEG), magnetoencephalography (MEG), and magnetic resonance imaging. However, there is a lack of comprehensive and accessible toolboxes able to integrate fNIRS advanced analyses with other modalities. NIRSTORM addresses this gap by offering a unified platform for multimodal neuroimaging analysis.

Aim: NIRSTORM aims to provide a user-friendly and comprehensive environment for multimodal analysis while supporting the entire fNIRS analysis pipeline, from experiment planning to the reconstruction of hemodynamic fluctuations on the cortex.

Approach: Developed in MATLAB®, NIRSTORM operates as a Brainstorm plugin, enhancing Brainstorm's capabilities for analyzing fNIRS data. Brainstorm is a widely used, GUI-based software originally designed for statistical analysis and source imaging of EEG and MEG data.

Results: NIRSTORM supports conventional fNIRS preprocessing and statistical analyses while introducing new advanced features such as optimal montage for planning optode placement and maximum entropy on the mean (MEM) for reconstructing hemodynamic fluctuations on the cortical surface.

Conclusion: As an open-access and user-friendly plugin, NIRSTORM extends Brainstorm's functionality to fNIRS, bridging the gap between EEG/MEG and hemodynamic analyses.





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