Keyword search (4,163 papers available)

"ecology" Keyword-tagged Publications:

Title Authors PubMed ID
1 Season and city shape urban bioaerosol composition beyond vegetation and socioeconomic gradients Poirier S; Rondeau-Leclaire J; Faticov M; Roy A; Lajeunesse G; Lucier JF; Tardif S; Kembel SW; Ziter C; Laprise C; Paquette A; Girard C; Laforest-Lapointe I; 41785576
BIOLOGY
2 Scientists warning: we must change paradigm for a revolution in toxicology and world food supply Seralini GE; Jungers G; Andersen A; Antoniou M; Aschner M; Bacon MH; Bertrand M; Bohn T; Bonfleur ML; Bücking E; Defarge N; Djemil R; Domingo JL; Douzelet J; Fagan J; Fournier T; Garcia JLY; Gil S; Hervé-Gruyer P; Hilbeck A; Hilty L; Huber D; Joyeux H; Khan I; Kouretas D; Lemarchand F; Loening U; Longo G; Mesnage R; Nikolopoulou DI; Panoff JM; Parente C; Robinson C; Scherber C; Sprangers D; Sultan C; Tsatsakis A; Vandelac L; Wan NF; Wynne B; Zaller JG; Zerrad-Saadi A; Zhang X; 41551494
CHEMBIOCHEM
3 Land-use history causes differences in park nighttime cooling capacity and forest structure Richmond IC; Paulauskas MA; Padvaiskas E; Gonzàlez Sinisterra LC; Hutt-Taylor K; Robitaille AL; Ziter CD; 40761092
BIOLOGY
4 Human recreational activity does not influence open cup avian nest survival in urban green spaces Cull CA; Guest MJ; Frei B; Ziter CD; 39897430
BIOLOGY
5 Beyond the Illusion of Controlled Environments: How to Embrace Ecological Pertinence in Research? Cassandre Vielle 39777969
BIOLOGY
6 Spatial versus spatio-temporal approaches for studying metacommunities: a multi-taxon analysis in Mediterranean and tropical temporary ponds Gálvez Á; Peres-Neto PR; Castillo-Escrivà A; Bonilla F; Camacho A; García-Roger EM; Iepure S; Miralles J; Monrós JS; Olmo C; Picazo A; Rojo C; Rueda J; Sasa M; Segura M; Armengol X; Mesquita-Joanes F; 38565154
BIOLOGY
7 Connectivity of stormwater ponds impacts Odonata abundance and species richness Richmond IC; Perron MC; Boyle SP; Pick FR; 38435963
BIOLOGY
8 Cone allometry and seed protection from fire are similar in serotinous and nonserotinous conifers Greene DF; Kane JM; Pounden E; Michaletz ST; 38375897
BIOLOGY
9 Heterogeneous dispersal networks to improve biodiversity science Savary P; Lessard JP; Peres-Neto PR; 37891075
BIOLOGY
10 The evolution of plasticity at geographic range edges Usui T; Lerner D; Eckert I; Angert AL; Garroway CJ; Hargreaves A; Lancaster LT; Lessard JP; Riva F; Schmidt C; van der Burg K; Marshall KE; 37183152
BIOLOGY
11 Reproducibility in ecology and evolution: Minimum standards for data and code Jenkins GB; Beckerman AP; Bellard C; Benítez-López A; Ellison AM; Foote CG; Hufton AL; Lashley MA; Lortie CJ; Ma Z; Moore AJ; Narum SR; Nilsson J; O' Boyle B; Provete DB; Razgour O; Rieseberg L; Riginos C; Santini L; Sibbett B; Peres-Neto PR; 37181203
BIOLOGY
12 A resistome survey across hundreds of freshwater bacterial communities reveals the impacts of veterinary and human antibiotics use Kraemer SA; Barbosa da Costa N; Oliva A; Huot Y; Walsh DA; 36338036
BIOLOGY
13 Inconsistent response of taxonomic groups to space and environment in mediterranean and tropical pond metacommunities Gálvez Á; Peres-Neto PR; Castillo-Escrivà A; Bonilla F; Camacho A; García-Roger EM; Iepure S; Miralles-Lorenzo J; Monrós JS; Olmo C; Picazo A; Rojo C; Rueda J; Sahuquillo M; Sasa M; Segura M; Armengol X; Mesquita-Joanes F; 36199222
BIOLOGY
14 Population demography maintains biogeographic boundaries Schmidt C; Muñoz G; Lancaster LT; Lessard JP; Marske KA; Marshall KE; Garroway CJ; 35753949
BIOLOGY
15 Overestimation of Postpartum Depression Prevalence Based on a 5-item Version of the EPDS: Systematic Review and Individual Participant Data Meta-analysis Thombs BD; Levis B; Lyubenova A; Neupane D; Negeri Z; Wu Y; Sun Y; He C; Krishnan A; Vigod SN; Bhandari PM; Imran M; Rice DB; Azar M; Chiovitti MJ; Saadat N; Riehm KE; Boruff JT; Cuijpers P; Gilbody S; Ioannidis JPA; Kloda LA; Patten SB; Shrier I; Ziegelstein RC; Comeau L; Mitchell ND; Tonelli M; Barnes J; Beck CT; Bindt C; Figueiredo B; Helle N; Howard LM; Kohlhoff J; Kozinszky Z; Leonardou AA; Radoš SN; Quispel C; Rochat TJ; Stein A; Stewart RC; Tadinac M; Tandon SD; Tendais I; Töreki A; Tran TD; Trevillion K; Turner K; Vega-Dienstmaier JM; Benedetti A; 33104415
LIBRARY
16 What attributes are relevant for drainage culverts to serve as efficient road crossing structures for mammals? Brunen B, Daguet C, Jaeger JAG 32510423
GEOGRAPHY
17 Sender and receiver experience alters the response of fish to disturbance cues. Goldman JA, Feyten LEA, Ramnarine IW, Brown GE 32440286
BIOLOGY
18 An adaptive plan for prioritizing road sections for fencing to reduce animal mortality. Spanowicz AG, Teixeira FZ, Jaeger JAG 32227646
GEOGRAPHY
19 Metabolic networks of the human gut microbiota. Selber-Hnatiw S, Sultana T, Tse W, Abdollahi N, Abdullah S, Al Rahbani J, Alazar D, Alrumhein NJ, Aprikian S, Arshad R, Azuelos JD, Bernadotte D, Beswick N, Chazbey H, Church K, Ciubotaru E, D'Amato L, Del Corpo T, Deng J, Di Giulio BL, Diveeva D, Elahie E, Frank JGM, Furze E, Garner R, Gibbs V, Goldberg-Hall R, Goldman CJ, Goltsios FF, Gorjipour K, Grant T, Greco B, Guliyev N, Habrich A, Hyland H, Ibrahim N, Iozzo T, Jawaheer-Fenaoui A, Jaworski JJ, Jhajj MK, Jones J, Joyette R, Kaudeer S, Kelley S, Ki 31799915
BIOLOGY
20 How do landscape context and fences influence roadkill locations of small and medium-sized mammals? Plante J, Jaeger JAG, Desrochers A 30711836
GEOGRAPHY
21 Beyond neutrality: disentangling the effects of species sorting and spurious correlations in community analysis. Clappe S, Dray S, Peres-Neto PR 29723919
BIOLOGY

 

Title:Beyond neutrality: disentangling the effects of species sorting and spurious correlations in community analysis.
Authors:Clappe SDray SPeres-Neto PR
Link:https://www.ncbi.nlm.nih.gov/pubmed/29723919?dopt=Abstract
DOI:10.1002/ecy.2376
Publication:Ecology
Keywords:Moran spectral randomizationdirect gradient analysisenvironmental effectlimited dispersalmetacommunity ecologyneutral dynamicsspatial autocorrelationspatially constrained null modelvariation partitioning
PMID:29723919 Category:Ecology Date Added:2019-06-07
Dept Affiliation: BIOLOGY
1 Université de Lyon, F-69000, Lyon, France.
2 CNRS, UMR 5558, Laboratoire de Biométrie et Biologie Evolutive, F-69622, Villeurbanne, France.
3 Department of Biology, Concordia University, Montreal, Quebec, H4B 1R6, Canada.

Description:

Beyond neutrality: disentangling the effects of species sorting and spurious correlations in community analysis.

Ecology. 2018 Aug;99(8):1737-1747

Authors: Clappe S, Dray S, Peres-Neto PR

Abstract

The methods of direct gradient analysis and variation partitioning are the most widely used frameworks to evaluate the contributions of species sorting to metacommunity structure. In many cases, however, species are also driven by spatial processes that are independent of environmental heterogeneity (e.g., neutral dynamics). As such, spatial autocorrelation can occur independently in both species (due to limited dispersal) and the environmental data, leading to spurious correlations between species distributions and the spatialized (i.e., spatially autocorrelated) environment. In these cases, the method of variation partitioning may present high Type I error rates (i.e., reject the null hypothesis more often than the pre-established critical level) and inflated estimates regarding the environmental component that is used to estimate the importance of species sorting. In this paper, we (1) demonstrate that metacommunities driven by neutral dynamics (via limited dispersal) alone or in combination with species sorting leads to inflated estimates and Type I error rates when testing for the importance of species sorting; and (2) propose a general and flexible new variation partitioning procedure to adjust for spurious contributions due to spatial autocorrelation from the environmental fraction. We used simulated metacommunity data driven by pure neutral, pure species sorting, and mixed (i.e., neutral + species sorting dynamics) processes to evaluate the performances of our new methodological framework. We also demonstrate the utility of the proposed framework with an empirical plant dataset in which we show that half of the variation initially due to the environment by the standard variation partitioning framework was due to spurious correlations.

PMID: 29723919 [PubMed - in process]





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