Keyword search (4,164 papers available)

"genome sequencing" Keyword-tagged Publications:

Title Authors PubMed ID
1 Sequencing of a Dairy Isolate Unlocks em Kluyveromyces marxianus /em as a Host for Lactose Valorization Thornbury M; Knoops A; Summerby-Murray I; Dhaliwal J; Johnson S; Utomo JC; Joshi J; Narcross L; Remondetto G; Pouliot M; Whiteway M; Martin VJJ; 40629255
BIOLOGY
2 Widespread admixture blurs population structure and confounds Lake Trout (Salvelinus namaycush) conservation even in the genomic era Bernos TA; Gibelli J; Michaelides S; Won H; Jeon HB; Marin K; Boguski DA; Janjua MY; Gallagher CP; Howland KL; Fraser DJ; 39730611
BIOLOGY
3 Development of SNP Panels from Low-Coverage Whole Genome Sequencing (lcWGS) to Support Indigenous Fisheries for Three Salmonid Species in Northern Canada Beemelmanns A; Bouchard R; Michaelides S; Normandeau E; Jeon HB; Chamlian B; Babin C; Hénault P; Perrot O; Harris LN; Zhu X; Fraser D; Bernatchez L; Moore JS; 39552382
BIOLOGY
4 Genome and secretome insights: unravelling the lignocellulolytic potential of Myceliophthora verrucosa for enhanced hydrolysis of lignocellulosic biomass Sharma G; Kaur B; Singh V; Raheja Y; Falco MD; Tsang A; Chadha BS; 38676717
CSFG
5 Community-led risk analysis of direct-to-consumer whole-genome sequencing Samlali K; Thornbury M; Venter A; 35939839
ENCS
6 Neutral and adaptive drivers of genomic change in introduced brook trout (Salvelinus fontinalis) populations revealed by pooled sequencing Brookes B; Jeon HB; Derry AM; Post JR; Rogers SM; Humphries S; Fraser DJ; 35154655
BIOLOGY
7 Genetic Characterization of Mutations Related to Conidiophore Stalk Length Development in Aspergillus niger Laboratory Strain N402 Demirci E; Arentshorst M; Yilmaz B; Swinkels A; Reid ID; Visser J; Tsang A; Ram AFJ; 33959152
CSFG
8 Genome Sequence Resource of Bacillus velezensis EB14, a native endophytic bacterial strain with biocontrol potential against the poplar stem canker causative pathogen, Sphaerulina musiva. Naik S, Tsang A, Ramanan US, Dayanandan S 33263425
BIOLOGY
9 Functional Characterization of Clinical Isolates of the Opportunistic Fungal Pathogen Aspergillus nidulans. Bastos RW, Valero C, Silva LP, Schoen T, Drott M, Brauer V, Silva-Rocha R, Lind A, Steenwyk JL, Rokas A, Rodrigues F, Resendiz-Sharpe A, Lagrou K, Marcet-Houben M, Gabaldón T, McDonnell E, Reid I, Tsang A, Oakley BR, Loures FV, Almeida F, Huttenlocher A, Keller NP, Ries LNA, Goldman GH 32269156
CSFG

 

Title:Genome Sequence Resource of Bacillus velezensis EB14, a native endophytic bacterial strain with biocontrol potential against the poplar stem canker causative pathogen, Sphaerulina musiva.
Authors:Naik STsang ARamanan USDayanandan S
Link:https://www.ncbi.nlm.nih.gov/pubmed/33263425
DOI:10.1094/PHYTO-09-20-0433-A
Publication:Phytopathology
Keywords:biological controlforest pathologyfungal pathogensgenomicsmicrobe-genome sequencing
PMID:33263425 Category:Phytopathology Date Added:2020-12-03
Dept Affiliation: BIOLOGY
1 Centre for Structural and Functional Genomics, Department of Biology, Concordia University, 7141 Sherbrooke Street West, Montreal, Quebec H4B 1R6, Canada.
2 Department of Crop Physiology and School of Ecology and Conservation, University of Agricultural Sciences, Bengaluru 560065, Karnataka, India.

Description:

Genome Sequence Resource of Bacillus velezensis EB14, a native endophytic bacterial strain with biocontrol potential against the poplar stem canker causative pathogen, Sphaerulina musiva.

Phytopathology. 2020 Dec 02; :

Authors: Naik S, Tsang A, Ramanan US, Dayanandan S

Abstract

Bacillus velezensis EB14, isolated from a leaf of Populus ? jackii, possesses antagonistic activity against Sphaerulina musiva, a fungal pathogen of Populus sp. that causes leaf spots and stem cankers on Poplars limiting the utility of hybrid poplars as plantation trees. We sequenced the genome of B. velezensis EB14 to gain insights into the underlying basis of its antagonistic activity. Here, we report the complete genome sequence of B. velezensis EB14, a gram-positive bacterium of the family Bacillaceae. Through antiSMASH analysis, we predicted several gene clusters coding for the biosynthesis of antimicrobial compounds, and several genes involved in plant bacterial interactions. These findings support the potential of developing B. velezensis EB14 as a biocontrol agent against S. musiva in poplar plantations. The genome of B. velezensis EB14 along with genome sequences of closely related B. velezensis species are invaluable for comparative genomic analyses to gain insights into bacterial, fungal and host plant interactions.

PMID: 33263425 [PubMed - as supplied by publisher]





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