Keyword search (4,163 papers available)

"growth" Keyword-tagged Publications:

Title Authors PubMed ID
1 Trajectories of Alcohol-Related Problems Among First-Year Nursing Students: Nature, Predictors, and Outcomes Cheyroux P; Morin AJS; O' Connor RM; Colombat P; Vancappel A; Eltanoukhi R; Gillet N; 41797206
PSYCHOLOGY
2 Proposing Targets and Limits to Urban Sprawl: How Likely are Current Greenbelt Scenarios for Montreal to Achieve Proposed Reference Values by 2070? Mosharafian S; Jaeger JAG; 41436679
CONCORDIA
3 Ingestion of polyethylene microplastics impacts cichlid behaviour despite having low retention time Felismino MEL; Chevallier Rufigny S; Gonzalez-Fleurant SE; Brown GE; 39862685
BIOLOGY
4 Developmental heterogeneity of school burnout across the transition from upper secondary school to higher education: A 9-year follow-up study Nadon L; Morin AJS; Gilbert W; Olivier E; Salmela-Aro K; 39645324
PSYCHOLOGY
5 Urban sprawl in Canada: Values in all 33 Census Metropolitan Areas and corresponding 469 Census Subdivisions between 1991 and 2011 Pourali M; Townsend C; Kross A; Guindon A; Jaeger JAG; 35242923
LIBRARY
6 Binary Cu2-xS Templates Direct the Formation of Quaternary Cu2ZnSnS4 (Kesterite, Wurtzite) Nanocrystals Yarur Villanueva F; Green PB; Qiu C; Ullah SR; Buenviaje K; Howe JY; Majewski MB; Wilson MWB; 34705409
CNSR
7 Creating doorways: finding meaning and growth through art therapy in the face of life-threatening illness Reilly RC; Lee V; Laux K; Robitaille A; 34487868
CONCORDIA
8 The effect of classroom aggression-related peer group norms on students' short-term trajectories of aggression Velásquez AM; Saldarriaga LM; Castellanos M; Bukowski WM; 34302295
PSYCHOLOGY
9 Genetic Characterization of Mutations Related to Conidiophore Stalk Length Development in Aspergillus niger Laboratory Strain N402 Demirci E; Arentshorst M; Yilmaz B; Swinkels A; Reid ID; Visser J; Tsang A; Ram AFJ; 33959152
CSFG
10 Identifying potential drug targets and candidate drugs for COVID-19: biological networks and structural modeling approaches Selvaraj G; Kaliamurthi S; Peslherbe GH; Wei DQ; 33968364
CERMM
11 Loss of Arp1, a putative actin-related protein, triggers filamentous and invasive growth and impairs pathogenicity in Candida albicans. Yao S, Feng Y, Islam A, Shrivastava M, Gu H, Lu Y, Sheng J, Whiteway M, Feng J 33363697
BIOLOGY
12 Income inequality and social gradients in children's height: a comparison of cohort studies from five high-income countries. Bird PK, Pickett KE, Graham H, Faresjö T, Jaddoe VWV, Ludvigsson J, Raat H, Seguin L, Wijtzes AI, McGrath JJ 31909223
PSYCHOLOGY
13 Population variation in density-dependent growth, mortality and their trade-off in a stream fish. Matte JM, Fraser DJ, Grant JWA 31642512
BIOLOGY
14 Lithocholic bile acid accumulated in yeast mitochondria orchestrates a development of an anti-aging cellular pattern by causing age-related changes in cellular proteome. Beach A, Richard VR, Bourque S, Boukh-Viner T, Kyryakov P, Gomez-Perez A, Arlia-Ciommo A, Feldman R, Leonov A, Piano A, Svistkova V, Titorenko VI 25839782
MASSSPEC
15 Integration of Growth and Cell Size via the TOR Pathway and the Dot6 Transcription Factor in Candida albicans. Chaillot J, Tebbji F, Mallick J, Sellam A 30593490
BIOLOGY

 

Title:Identifying potential drug targets and candidate drugs for COVID-19: biological networks and structural modeling approaches
Authors:Selvaraj GKaliamurthi SPeslherbe GHWei DQ
Link:https://pubmed.ncbi.nlm.nih.gov/33968364/
DOI:10.12688/f1000research.50850.3
Publication:F1000Research
Keywords:Biological network analysisCOVID-19ERBB4LimmaSARS-CoV-2Walktrap algorithmdrug targetsgrowth factor receptor bindingprotein-protein dockingsignal transduction pathwayswortmannin
PMID:33968364 Category: Date Added:2021-05-10
Dept Affiliation: CERMM
1 Centre for Research in Molecular Modeling, Concordia University, Montreal, Quebec, H4B 1R6, Canada.
2 Centre of Interdisciplinary Science-Computational Life Sciences, College of Chemistry and Chemical Engineering,, Henan University of Technology, Zhengzhou, Henan, 450001, China.
3 The State Key Laboratory of Microbial Metabolism, College of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, Shanghai, 200240, China.
4 IASIA (International Association of Scientists in the Interdisciplinary Areas), 125 Boul. de Bromont, Quebec, J2L 2K7, Canada.

Description:

ackground: Coronavirus (CoV) is an emerging human pathogen causing severe acute respiratory syndrome (SARS) around the world. Earlier identification of biomarkers for SARS can facilitate detection and reduce the mortality rate of the disease. Thus, by integrated network analysis and structural modeling approach, we aimed to explore the potential drug targets and the candidate drugs for coronavirus medicated SARS. Methods: Differentially expression (DE) analysis of CoV infected host genes (HGs) expression profiles was conducted by using the Limma. Highly integrated DE-CoV-HGs were selected to construct the protein-protein interaction (PPI) network. Results: Using the Walktrap algorithm highly interconnected modules include module 1 (202 nodes); module 2 (126 nodes) and module 3 (121 nodes) modules were retrieved from the PPI network. MYC, HDAC9, NCOA3, CEBPB, VEGFA, BCL3, SMAD3, SMURF1, KLHL12, CBL, ERBB4, and CRKL were identified as potential drug targets (PDTs), which are highly expressed in the human respiratory system after CoV infection. Functional terms growth factor receptor binding, c-type lectin receptor signaling, interleukin-1 mediated signaling, TAP dependent antigen processing and presentation of peptide antigen via MHC class I, stimulatory T cell receptor signaling, and innate immune response signaling pathways, signal transduction and cytokine immune signaling pathways were enriched in the modules. Protein-protein docking results demonstrated the strong binding affinity (-314.57 kcal/mol) of the ERBB4-3cLpro complex which was selected as a drug target. In addition, molecular dynamics simulations indicated the structural stability and flexibility of the ERBB4-3cLpro complex. Further, Wortmannin was proposed as a candidate drug to ERBB4 to control SARS-CoV-2 pathogenesis through inhibit receptor tyrosine kinase-dependent macropinocytosis, MAPK signaling, and NF-kb singling pathways that regulate host cell entry, replication, and modulation of the host immune system. Conclusion: We conclude that CoV drug target "ERBB4" and candidate drug "Wortmannin" provide insights on the possible personalized therapeutics for emerging COVID-19.





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