Keyword search (4,163 papers available)

"Methods Mol Biol" Category Publications:

Title Authors PubMed ID
1 Using Models to (Re-)Design Synthetic Circuits. McCallum G, Potvin-Trottier L 33405217
BIOLOGY
2 Computer-Aided Design of Active Pseudoknotted Hammerhead Ribozymes. Najeh S, Zandi K, Djerroud S, Kharma N, Perreault J 32712917
ENCS
3 Metabolomic and lipidomic analyses of chronologically aging yeast. Richard VR, Bourque SD, Titorenko VI 25213255
BIOLOGY
4 A Cell-Free Content Mixing Assay for SNARE-Mediated Multivesicular Body-Vacuole Membrane Fusion. Karim MA, Samyn DR, Brett CL 30317513
BIOLOGY
5 Visualization of SNARE-Mediated Organelle Membrane Hemifusion by Electron Microscopy. Mattie S, Kazmirchuk T, Mui J, Vali H, Brett CL 30317518
BIOLOGY
6 Identification of Genes Involved in the Degradation of Lignocellulose Using Comparative Transcriptomics. Gruninger RJ, Reid I, Forster RJ, Tsang A, McAllister TA 28417376
CSFG
7 Isolation and Preparation of Extracellular Proteins from Lignocellulose Degrading Fungi for Comparative Proteomic Studies Using Mass Spectrometry Robert J Gruninger 28417377
CSFG
8 Introduction: Overview of Fungal Genomics. de Vries RP, Grigoriev IV, Tsang A 29876804
CSFG
9 Fungal Genomic DNA Extraction Methods for Rapid Genotyping and Genome Sequencing. Bellemare A, John T, Marqueteau S 29876805
CSFG
10 Mass Spectrometry-Based Proteomics Marcos Rafael Di Falco 29876812
CSFG
11 Evolutionary Adaptation to Generate Mutants. de Vries RP, Lubbers R, Patyshakuliyeva A, Wiebenga A, Benoit-Gelber I 29876815
BIOLOGY
12 Manual Gene Curation and Functional Annotation. McDonnell E, Strasser K, Tsang A 29876819
CSFG
13 Evaluating Programs for Predicting Genes and Transcripts with RNA-Seq Support in Fungal Genomes. Reid I 29876820
CSFG
14 Phylogenetic Analysis of Protein Family. Song L, Wu S, Tsang A 29876824
CSFG

 

Title:Phylogenetic Analysis of Protein Family.
Authors:Song L,  Wu S,  Tsang A
Link:www.ncbi.nlm.nih.gov/pubmed/29876824?dopt=Abstract
Publication:
Keywords:
PMID:29876824 Category:Methods Mol Biol Date Added:2019-06-04
Dept Affiliation: CSFG
1 Centre for Structural and Functional Genomics, Concordia University, 7141 Sherbrooke Street West, Montreal, H4B 1R6, Quebec, Canada. letian.song@concordia.ca.
2 Centre for Structural and Functional Genomics, Concordia University, 7141 Sherbrooke Street West, Montreal, H4B 1R6, Quebec, Canada.
3 Centre for Structural and Functional Genomics, Concordia University, Montreal, QC, Canada.

Description:

Phylogenetic Analysis of Protein Family.



Methods Mol Biol. 2018;1775:267-275



Authors: Song L, Wu S, Tsang A



Abstract

With the number of sequenced genomes increasing rapidly, it is impractical to perform functional and structural analyses on all individual proteins. Phylogenetic analysis employs a combination of molecular and statistical approaches to infer or estimate relationships among individuals. It provides a credible method to explore the relationship between sequence similarity and function of proteins belonging to the same family. This chapter describes a standardized framework of phylogenetic analysis to study large protein families. Bioinformatic approaches and online tools used in phylogenetic analyses are presented.



PMID: 29876824 [PubMed - indexed for MEDLINE]




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